EY683940

Overview
NameEY683940
Unique NameEY683940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_TAKRU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Fragment) OS=Takifugu rubripes GN=dlst PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.888e-21
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 1
Query:  379 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*G--EHIIYK 645
            E RV M+R+R R+A RLK++QNT A+LTTFNEVDM+N+ ++R+ +KDAFL+KH +KLG MS FVK A +AL  QP   AVI G    I+Y+
Sbjct:  178 ESRVKMSRMRLRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRTLHKDAFLKKHSIKLGFMSAFVKAAAHALTDQPAVNAVIDGATNEIVYR 268          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_DICDI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.888e-21
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 1
Query:  379 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*GEHIIY 642
            E RV MTR+R+R A RLKDSQNT A+LTTFNE+DM+ LM +R  YKD F +KHGVK G MS FVK +  AL+ QPI  A +    I+Y
Sbjct:  210 ETRVKMTRIRQRTAQRLKDSQNTAAMLTTFNELDMSALMNMRKTYKDEFEKKHGVKFGFMSAFVKASTIALKEQPIVNASVEENDIVY 297          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_RICBR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=sucB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.996e-21
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 1
Query:  370 KDRERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*GEHIIYKKLH 654
            ++R  RV M+RLRK +A RLKDSQNT A+LTTFNE+DM+ ++ LR  YKD F +KHGVKLG MS FV+  + AL+  P   A I G+ ++YK  +
Sbjct:  168 EERVERVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRGKYKDEFEKKHGVKLGFMSFFVRATIEALKLIPSVNAEIDGDDLVYKNYY 262          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_RAT (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlst PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.004e-20
Identity = 48/81 (59.26%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  379 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI 621
            E R  M R+R+R+A RLK++QNT A+LTTFNEVDM+N+ ++R+ +KDAFL+KH +KLG MS FVK +  ALQ QP+  AVI
Sbjct:  223 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVI 303          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_MOUSE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlst PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.004e-20
Identity = 48/81 (59.26%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  379 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI 621
            E R  M R+R+R+A RLK++QNT A+LTTFNEVDM+N+ ++R+ +KDAFL+KH +KLG MS FVK +  ALQ QP+  AVI
Sbjct:  223 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVI 303          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_RICCN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia conorii GN=sucB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.617e-20
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 1
Query:  370 KDRERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*GEHIIYKKLH 654
            ++R +RV M+RLRK +A RLKDSQNT A+LTTFNE+DM+ ++ LR+ YK+ F +KH VKLG MS FVK  + AL+  P   A I G+ ++YK  +
Sbjct:  163 EERVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEEFEKKHAVKLGFMSFFVKATIEALKLIPSVNAEIDGDDLVYKNYY 257          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_BOVIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Bos taurus GN=DLST PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.617e-20
Identity = 47/81 (58.02%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  379 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI 621
            E R  M R+R+R+A RLK++QNT A+LTTFNE+DM+N+ ++R+ +KDAFL+KH +KLG MS FVK +  ALQ QP+  AVI
Sbjct:  224 EHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVI 304          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_BARVB (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bartonella vinsonii subsp. berkhofii GN=sucB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.617e-20
Identity = 70/160 (43.75%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  376 RERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*GEHIIYKKLH*NTLLL*AQKKGPGCSGIPQAVRN*TLHKILKEFNH--PLQKGQMMVVNQLQRIG*GGKFPKNEGGV 849
            RE RV MT+LR+ +A RLKD+QNT A+LTTFNEVDM+ +M LR  YKD F +KHGVKLG M  F K   +AL+  P   A I G  IIYK  + N  +     KG     +  A +  +L +I KE      L +   + V+ +Q    GG F    GGV
Sbjct:  181 REERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDMSAVMGLRKRYKDLFEKKHGVKLGFMGFFTKAVCHALKELPAVNAEIDGTDIIYKN-YVNAGIAVGTDKGLVVPVVRDADQM-SLAEIEKEIGRLGRLARDGKLAVSDMQ----GGTFTITNGGV 334          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_BARQU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bartonella quintana GN=sucB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.617e-20
Identity = 69/160 (43.12%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  376 RERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*GEHIIYKKLH*NTLLL*AQKKGPGCSGIPQAVRN*TLHKILKEFNH--PLQKGQMMVVNQLQRIG*GGKFPKNEGGV 849
            RE RV MT+LR+ +A RLKD+QNT A+LTTFNEVDM+ +M LR  YKD F +KHGVKLG M  F K   +AL+  P   A I G  I+YK  + N  +     KG     +  A +  +L +I KE +    L +   + V+ +Q    GG F    GGV
Sbjct:  180 REERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDMSAVMDLRKRYKDLFEKKHGVKLGFMGFFTKAVCHALKEFPTVNAEIDGTDIVYKN-YVNAGIAVGTDKGLVVPVVRDADQM-SLAEIEKEISRLGRLARDGKLAVSDMQ----GGTFTITNGGV 333          
BLAST of EY683940 vs. ExPASy Swiss-Prot
Match: ODO2_RICTY (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi GN=sucB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.465e-20
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 1
Query:  370 KDRERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFVKPAVNALQHQPIDYAVI*GEHIIYKKLH 654
            ++R +RV M+RLRK +A RLKDSQNT A+LTTFNE+DM+ ++ LR+ YK+ F +KH VKLG MS FVK  + AL+  P   A I G+ ++YK  +
Sbjct:  166 EERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDLLYKNYY 260          
The following BLAST results are available for this feature:
BLAST of EY683940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ODO2_TAKRU6.888e-2157.14Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_DICDI6.888e-2159.09Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICBR8.996e-2153.68Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RAT2.004e-2059.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MOUSE2.004e-2059.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICCN2.617e-2052.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BOVIN2.617e-2058.02Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BARVB2.617e-2043.75Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BARQU2.617e-2043.13Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICTY4.465e-2052.63Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-D01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683940 ID=EY683940; Name=EY683940; organism=Citrus sinensis; type=EST; length=976bp
CCACGCGTCCGCTAGCTTTACTTCTTACTTTCTGAAAATGGACTGAATTC
TATTAGTTTGAATGGTTGTAACAATTTTTAATGTAACTGGTAGTAGCTTA
TAGCCAAGGAAGGTGAAACTGTGGAACCAGGTGCAAAGATTGCTGTTATT
TCAAAATCAGGTGAAGGTGTTGCTCAAGCTGCTTCAGCGGAGAAAGCTGC
TGCTCAGCCTCCACCTGCTGAAGAAAAGCCAAGTGCTGAGAAGCAAACTC
CTGAGTCAGAAGCTGCCCCTGCTGTAAAAGATAAAACACCCTCTGAACCA
CCTCCTACAGCCAAAAAACCTACTTCACCACCTTCAAAACCCATGGCTTC
AGAACCCCAGCTTCCTCCCAAGGACAGAGAGAGACGGGTCCCTATGACAA
GACTTAGGAAAAGGGTCGCTACTCGCTTGAAAGATTCTCAGAATACATTT
GCGTTGCTTACCACATTTAATGAGGTTGATATGACTAACTTGATGAAGCT
CCGCTCAGATTATAAGGATGCTTTTCTTGAAAAACATGGTGTGAAATTGG
GACTAATGTCGGGATTTGTCAAACCTGCTGTTAATGCACTCCAGCATCAG
CCCATTGATTATGCTGTCATTTGAGGGGAACACATCATATATAAAAAACT
ACATTGAAATACACTTTTGCTGTAGGCACAAAAAAAGGGTCCTGGTTGTT
CAGGGATTCCGCAAGCAGTAAGAAATTGAACTTTGCATAAAATATTAAAG
GAATTCAACCATCCTCTGCAGAAAGGCCAAATGATGGTTGTTAATCAGTT
ACAGAGAATTGGATGAGGGGGCAAGTTCCCCAAAAACGAGGGGGGGGTGA
CCGTTCGCAGGACATGTATTAAAAGAACTATGAATTAACATCCTCAAAAC
AACATGGAATTAATTACAGCACACAAAACACTAATCAATGAAACCAAAAT
AAAGAGAGGAAATGACAAACAGAAAG
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