EY683939

Overview
NameEY683939
Unique NameEY683939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.648e-19
Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 1
Query:  241 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSV 585
            KGQKAR G    GFEGGQ P+ RRLPKRGF N F L +  V LGKI   + AGK+D+ + +T   L  AG + ++ +DGVR++G G    K  + LE +  T  A AAVE AGGSV
Sbjct:   36 KGQKARTGVAIKGFEGGQMPLHRRLPKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGTGELSAK--VTLEVAYATKSAVAAVEKAGGSV 148          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.648e-19
Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 1
Query:  241 KGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            KGQ AR  ++  GFEGGQ PM RRLPKRGF N F+L F  + L +I   I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GRG  K K  I++E    +  A AAVE AGG+VK
Sbjct:   36 KGQTARSGVRIKGFEGGQMPMHRRLPKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGRGELKAK--INIEVYGASKSAIAAVEKAGGTVK 149          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_ACICJ (50S ribosomal protein L15 OS=Acidiphilium cryptum (strain JF-5) GN=rplO PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.152e-19
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 1
Query:  241 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSV 585
            KGQKAR G    GFEGGQ P+ RRLPKRGF N     + P+ +G +A LI +GKID+ + IT  TL+ AG        GVRL+GRG  +I   + +E S  +  A AA+E AGGSV
Sbjct:   36 KGQKAREGVSLNGFEGGQLPIYRRLPKRGFNNVNRKDYAPLNVGTLAALIESGKIDAGQKITEATLRAAGVYAGSKLAGVRLLGRG--EISQKVEIEVSGASASAIAAIEQAGGSV 149          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RM10_YEAST (54S ribosomal protein L10, mitochondrial OS=Saccharomyces cerevisiae GN=MRPL10 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.810e-19
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  241 KGQKARGTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSH--ELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVKRVHYNKLGLRALHKPEWF-EKKG 654
            KGQKARG +K  FEGGQTP+ +  PK GF N  +   + + L +I +  +  ++     E++ M  ++  G +   I+ GV+++  G      PI LEASR + +A AA+E AGG     +Y  LGLRA   P+WF EK+G
Sbjct:   94 KGQKARGKVKSWFEGGQTPIYKLFPKIGFTNVGAKPLKELNLKRIQWFHDKNRLHLQPGEVLDMNKMRKLGLVTGPIKYGVKILASGKFHYNLPIALEASRASAKAIAAIEKAGGKFTARYYTPLGLRAHLNPQWFLEKRG 234          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_METSB (50S ribosomal protein L15 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplO PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.810e-19
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1
Query:  241 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            KGQKAR G    GFEGGQ P+ RRLPKRGF NPF L +  + LG++   ++AG+ID   ++T ++L  +G I K   DGV+++G G  K K  +  + +  +  A AA+EAAGGS++
Sbjct:   36 KGQKARTGVAIKGFEGGQMPLHRRLPKRGFYNPFGLDYNEINLGRLQEAVDAGRIDVAAVVTNESLIASGLISKP-RDGVKILGVGELKAK--LSFQVAAASKSAVAAIEAAGGSIE 149          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.794e-19
Identity = 56/117 (47.86%), Postives = 72/117 (61.54%), Query Frame = 1
Query:  241 KGQKAR-GTMKFGFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            KGQKAR G    GFEGGQ P+ RRLPKRGFKN F   + PV LG +   I  GKID+  ++T   L+ AG +G     GVRL+ +G  ++   + +E S  +  A AAVE AGGSV+
Sbjct:   36 KGQKAREGVSLNGFEGGQLPLYRRLPKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAKG--ELARAVTIEVSGASATAVAAVEKAGGSVR 150          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.261e-19
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 1
Query:  241 KGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            KGQ AR  ++  GFEGGQ PM RRLPKRGF N F+L F  + L +I   I+A K+D+  +I  + L  +GA+ ++ +DGVRL+GRG  +I   +++E    +  A AAVE AGG+VK
Sbjct:   36 KGQTARSGVRIKGFEGGQMPMHRRLPKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAEALVKSGAL-RRAKDGVRLLGRG--EITAKVNIEVHGASKSAIAAVEKAGGTVK 149          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_BRUSU (50S ribosomal protein L15 OS=Brucella suis GN=rplO PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.822e-18
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  139 LSLNDLRDKVPR-KQXXXXXXXXXXXXXXXXXXXHKGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            + LNDLRDK    K                     KGQK+R  +   GFEGGQ P+ RRLPKRGF N F+ +F  V LG+I   I+AGK+D+  ++ + +LK AG I ++ +DGVR++  G  K K  +  E +  +  A   +E AGGS+K
Sbjct:    1 MKLNDLRDKPGSVKARKRVGRGIGSGTGKTGGRGVKGQKSRSGVSINGFEGGQMPIYRRLPKRGFTNIFAKSFNVVSLGRIQAAIDAGKLDAKAVVNLDSLKAAGVI-RRAKDGVRILSDGELKAK--VAFEVAGASKAAVEKIEKAGGSIK 149          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_BRUSI (50S ribosomal protein L15 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplO PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.822e-18
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  139 LSLNDLRDKVPR-KQXXXXXXXXXXXXXXXXXXXHKGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            + LNDLRDK    K                     KGQK+R  +   GFEGGQ P+ RRLPKRGF N F+ +F  V LG+I   I+AGK+D+  ++ + +LK AG I ++ +DGVR++  G  K K  +  E +  +  A   +E AGGS+K
Sbjct:    1 MKLNDLRDKPGSVKARKRVGRGIGSGTGKTGGRGVKGQKSRSGVSINGFEGGQMPIYRRLPKRGFTNIFAKSFNVVSLGRIQAAIDAGKLDAKAVVNLDSLKAAGVI-RRAKDGVRILSDGELKAK--VAFEVAGASKAAVEKIEKAGGSIK 149          
BLAST of EY683939 vs. ExPASy Swiss-Prot
Match: RL15_BRUO2 (50S ribosomal protein L15 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplO PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.822e-18
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  139 LSLNDLRDKVPR-KQXXXXXXXXXXXXXXXXXXXHKGQKARGTMKF-GFEGGQTPMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDGVRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVK 588
            + LNDLRDK    K                     KGQK+R  +   GFEGGQ P+ RRLPKRGF N F+ +F  V LG+I   I+AGK+D+  ++ + +LK AG I ++ +DGVR++  G  K K  +  E +  +  A   +E AGGS+K
Sbjct:    1 MKLNDLRDKPGSVKARKRVGRGIGSGTGKTGGRGVKGQKSRSGVSINGFEGGQMPIYRRLPKRGFTNIFAKSFNVVSLGRIQAAIDAGKLDAKAVVNLDSLKAAGVI-RRAKDGVRILSDGELKAK--VAFEVAGASKAAVEKIEKAGGSIK 149          
The following BLAST results are available for this feature:
BLAST of EY683939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
RL15_XANP21.648e-1950.0050S ribosomal protein L15 OS=Xanthobacter autotrop... [more]
RL15_BRASO1.648e-1948.7250S ribosomal protein L15 OS=Bradyrhizobium sp. (s... [more]
RL15_ACICJ2.152e-1949.1450S ribosomal protein L15 OS=Acidiphilium cryptum ... [more]
RM10_YEAST2.810e-1939.0154S ribosomal protein L10, mitochondrial OS=Saccha... [more]
RL15_METSB2.810e-1945.3050S ribosomal protein L15 OS=Methylocella silvestr... [more]
RL15_GLUDA4.794e-1947.8650S ribosomal protein L15 OS=Gluconacetobacter dia... [more]
RL15_BRASB6.261e-1947.0150S ribosomal protein L15 OS=Bradyrhizobium sp. (s... [more]
RL15_BRUSU1.822e-1839.4750S ribosomal protein L15 OS=Brucella suis GN=rplO... [more]
RL15_BRUSI1.822e-1839.4750S ribosomal protein L15 OS=Brucella suis (strain... [more]
RL15_BRUO21.822e-1839.4750S ribosomal protein L15 OS=Brucella ovis (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-C12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683939 ID=EY683939; Name=EY683939; organism=Citrus sinensis; type=EST; length=959bp
CCACGCGTCCGCTCAATACCCACTTTAAACCATAGAGCAGTTCCATTCCA
ATCCCTTCAATTTGCACAATGCCCTAATTCAACCCCGAACGAGCAAATTT
CGAGTCAATTTGTTATGGGCATTAGGTCTTTTAGCCTATTAAGCTTGAAT
GATTTGAGAGACAAAGTGCCTAGAAAGCAAAAGACAAGAAAAGGAAGAGG
TATTGGGTCAGGTAAAGGGAAGACTGCAGGGAGAGGCCACAAGGGACAGA
AGGCAAGAGGAACTATGAAGTTTGGATTTGAAGGTGGTCAAACGCCAATG
CGTCGTCGTTTGCCCAAACGTGGGTTTAAGAACCCTTTTAGCCTCACCTT
TCAGCCAGTAGGTTTGGGAAAGATTGCATATCTAATAAATGCAGGGAAGA
TAGATTCTCATGAATTAATTACAATGAAAACTCTCAAGGATGCTGGAGCA
ATAGGGAAGCAGATAGAAGATGGAGTAAGATTGATGGGTCGTGGAGCTGA
AAAGATCAAGTGGCCAATTCATCTTGAGGCGTCAAGAGTAACCGTTAGGG
CAAAAGCAGCAGTTGAAGCTGCCGGTGGTTCTGTCAAAAGAGTGCATTAC
AACAAGCTGGGTTTGCGGGCATTGCATAAGCCGGAGTGGTTTGAGAAGAA
GGGGAGGTTGCTGCCAAGACCAGCTAGGCGCCCTCCTAAATGGCAGATAA
AGTTGATAGCATTGGGTCTCTTCCCGGCCCCCCCAACCCCTTTCATTTTT
CCCCCGAAAAGGGAAGCAACAGCCTCCCCCATCGGCCCAGGGCTAACAAA
AATAAACAATTCAGTTTGGTTTTCCTCCTTCAAATTTTTGTATTTTTCCA
ACCTTAAATTAATCCACACGGGGGGAGAGGATTTTGAGAGAAATTTTGGA
ATTAAGGGGGGAGAAGGGTTTTTTTTCCCCGGGCCGGGGGCCAGGGGAAA
GAAGCGGGG
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