EY683936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 390.963 bits (1003), Expect = 6.041e-108 Identity = 206/285 (72.28%), Postives = 228/285 (80.00%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 +QT D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + P P T ++ +P ++ R +KF+ AP +E+ + GV KGIF N+ + KLV+T PGQ Sbjct: 64 QQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIV----TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCKGIFRTDNVA--DDDIVKLVDT-FPGQ 340
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 3.916e-107 Identity = 205/285 (71.93%), Postives = 228/285 (80.00%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 +QT D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + P P T ++ +P ++ R +KF+ AP +E+ + GV KGIF N+ E + K+V+ PGQ Sbjct: 64 QQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIV----TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCKGIFRTDNVPEE--DIVKVVDQ-FPGQ 340
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 382.489 bits (981), Expect = 2.149e-105 Identity = 203/285 (71.23%), Postives = 227/285 (79.65%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNT+ G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + P P T ++ +P ++ R +KF+ AP +++ V GV KGIF N+ E + K+V++ PGQ Sbjct: 55 KQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIV----TGNDFSTLYAPLIRDGRMEKFYWAPTRDDRV-GVCKGIFRTDNVPDE--DIVKIVDS-FPGQ 331
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 380.948 bits (977), Expect = 6.251e-105 Identity = 194/262 (74.05%), Postives = 216/262 (82.44%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIF 785 KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + P T ++ +P ++ R +KF+ AP +E+ + GV KGIF Sbjct: 64 KQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIC----TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCKGIF 320
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 5.292e-104 Identity = 200/285 (70.18%), Postives = 224/285 (78.60%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN +DG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMC L INDLDAGAGR+GGTTQYTVNNQMVNA LMNIADNPT P + P P T ++ +P ++ R +KF+ AP +E+ + GV GIF N+ K + KLV+T PGQ Sbjct: 64 KQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIV----TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCIGIFRSDNVA--KEDIVKLVDT-FPGQ 340
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 1.179e-103 Identity = 202/285 (70.88%), Postives = 225/285 (78.95%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIAD PT P + P P T ++ +P ++ R +KF+ AP +E+ + GV KGIF N+ E + +LV+T PGQ Sbjct: 52 KQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIV----TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCKGIFRTDNVPDE--AVVRLVDT-FPGQ 327
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 9.980e-103 Identity = 197/287 (68.64%), Postives = 224/287 (78.05%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTP--WYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG +CCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + Q+ P T ++ +P ++ R +KF+ AP +E+ + GV KGIF N+ E + K+V+T PGQ Sbjct: 68 KQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIV------TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCKGIFRTDNVPEE--AVIKIVDT-FPGQ 344
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 9.980e-103 Identity = 199/287 (69.34%), Postives = 222/287 (77.35%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTP--WYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + Q+ P T ++ +P ++ R +KF+ AP +E+ + GV GIF N+ E + K+V+ PGQ Sbjct: 68 KQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIV------TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCTGIFRTDNVPAE--DVVKIVDN-FPGQ 344
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 372.859 bits (956), Expect = 1.702e-102 Identity = 196/285 (68.77%), Postives = 224/285 (78.60%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKM CL INDLDAGAGRMGGTTQYTVNNQMVNA LMNIADNPT P + P P T ++ +P ++ R +KF+ AP +E+ + GV KGIF G+++ + +LV+T PGQ Sbjct: 60 KQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIV----TGNDFSTLYAPLIRDGRMEKFYWAPTREDRI-GVCKGIFR--TDGVDEEHVVQLVDT-FPGQ 336
BLAST of EY683936 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 2.223e-102 Identity = 194/285 (68.07%), Postives = 221/285 (77.54%), Query Frame = 3 Query: 3 KQTKHDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNAPLMNIADNPTLCPTPWYVQQGGEPPCPNHSHR**TFSNLCNAPSPSLK-VRWKKFHGAPNKEETVFGVGKGIFTEINMGLEKPTLSKLVETLLPGQ 854 KQT+ D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGR+GGTTQYTVNNQMVNA LMNIADNPT P + P P T ++ +P ++ R KF+ AP +E+ + G+ GIF + E + KLV+T PGQ Sbjct: 61 KQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIV----TGNDFSTLYAPLIRDGRMDKFYWAPTREDRI-GICTGIFRTDGVPFE--DIVKLVDT-FPGQ 337 The following BLAST results are available for this feature:
BLAST of EY683936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY683936 ID=EY683936; Name=EY683936; organism=Citrus sinensis; type=EST; length=1024bpback to top |