EY683918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.627e-44 Identity = 77/116 (66.38%), Postives = 99/116 (85.34%), Query Frame = 2 Query: 308 MSILPKSESIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYE 655 MS+ K +SI IREVWNDNL+ E LIRD+VDD+PY+AMDTEFPGIV+R +G FKS+++Y+Y+ LK NV++LK+IQLGLTF++E GNLP CGTDKYC+WQFNFREF D D++A + Sbjct: 1 MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALD 116
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 8.926e-43 Identity = 77/115 (66.96%), Postives = 98/115 (85.22%), Query Frame = 2 Query: 308 MSILPKSESIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTD-KYCLWQFNFREFSPDEDVYA 649 MS+ K +SI IREVWNDNLE E +LIR++VDD+P++AMDTEFPGIV R +G FK+++EY+Y+ LK NV++LK+IQLGLTF+DE GNLP CGTD KYC+WQFNFREF + D+YA Sbjct: 1 MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYA 115
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 5.415e-40 Identity = 75/111 (67.57%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 323 KSESIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYE 655 K +SI IREVW+ NL EF+LIR+IVD + YIAMDTEFPG+VL+ + FK +++ NY+ LK NVDLLKLIQ+GLTF+DENGNLP CGTDK+C+WQFNFREF+ ED+YA E Sbjct: 6 KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASE 116
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.878e-33 Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 323 KSESIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSI------GNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYE 655 + ++I IREVWN NLE E +LI +DD+PY+AMDTEFPGIV +++ + EYNY LK NV++LKLIQLGLT +DE GNLP CGT+K C+WQFNFREF+ D++A + Sbjct: 10 EDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALD 126
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.915e-26 Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 341 IREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYEFY*TVIPNWH*F*KKQKEGW*RL*KFIELLM 748 I EVW NLE E IR+IV Y YIAMDTEFPG+V+R IG F+SS +Y YQ L+ NVDLLK+IQLGLTFT+E G P G + WQFNF+ F+ ED+Y+ + + + F K ++EG L F ELLM Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS-GIN---TWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTL-HFAELLM 141
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.915e-26 Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 341 IREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYEFY*TVIPNWH*F*KKQKEGW*RL*KFIELLM 748 I EVW NLE E IR+IV Y YIAMDTEFPG+V+R IG F+SS +Y YQ L+ NVDLLK+IQLGLTFT+E G P G + WQFNF+ F+ ED+Y+ + + + F K ++EG L F ELLM Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS-GIN---TWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTL-HFAELLM 141
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.885e-25 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 305 NMSILPKSESIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKY--CLWQFNFREFSPDEDVYA 649 N + P ++ REVW +NLE EF LI +I+DDYP+I+MDTEFPG++ +S F + + Y LK NVD L LIQ+GLT +D NGNLP G D + +W+FNFR+F D +A Sbjct: 7 NRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHA 122
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.921e-25 Identity = 81/195 (41.54%), Postives = 110/195 (56.41%), Query Frame = 2 Query: 332 SIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYEFY*TVIPNWH*F*KKQKEGW*RL*KFIELLMVVWDWG*MIVGLGGTFSYRKMDFGYLA*IGRIGKGFAWRTEAGFFFELVPKMYFPL 916 S I EVW NLE E IR + + YIAMDTEFPG+V R IG F+S+++Y YQ L+ NVDLLK+IQLGLTF +E G P GT WQFNF+ F+ ED+YA + + + F K ++EG + F ELLM + G+ + DFGYL +I E FFE++ +++FP+ Sbjct: 9 SQRICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETM-YFAELLMT--SGVVLCEGVKWLSFHSGYDFGYLI---KILSNSKLPDEEVDFFEIL-RLFFPI 191
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.921e-25 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 341 IREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYE 655 IR+VW+ NL+ E +LI +++ YP ++MDTEFPG+V R +G FKSS +Y+YQ L+ NVD LK+IQ+GL +DE GN P + C WQFNF F+ +D+YA E Sbjct: 22 IRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVDSLKIIQIGLALSDEEGNAPV----EACTWQFNF-TFNLQDDMYAPE 121
BLAST of EY683918 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.096e-24 Identity = 80/195 (41.03%), Postives = 110/195 (56.41%), Query Frame = 2 Query: 332 SIHIREVWNDNLEHEFSLIRDIVDDYPYIAMDTEFPGIVLRSIGNFKSSSEYNYQNLKVNVDLLKLIQLGLTFTDENGNLPKCGTDKYCLWQFNFREFSPDEDVYAYEFY*TVIPNWH*F*KKQKEGW*RL*KFIELLMVVWDWG*MIVGLGGTFSYRKMDFGYLA*IGRIGKGFAWRTEAGFFFELVPKMYFPL 916 S I EVW NL+ E IR ++ Y Y+AMDTEFPG+V R IG F+S+++Y YQ L+ NVDLLK+IQLGLTF +E G P GT WQFNF+ F+ ED+YA + + + F K ++EG F ELLM + G+ + DFGYL +I E FFE++ +++FP+ Sbjct: 9 SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGI-ETQYFAELLMT--SGVVLCEGVKWLSFHSGYDFGYLI---KILTNSNLPEEELDFFEIL-RLFFPV 191 The following BLAST results are available for this feature:
BLAST of EY683918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY683918 ID=EY683918; Name=EY683918; organism=Citrus sinensis; type=EST; length=1024bpback to top |