EY683908

Overview
NameEY683908
Unique NameEY683908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP4_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.381e-16
Identity = 44/65 (67.69%), Postives = 48/65 (73.85%), Query Frame = 2
Query:   26 GYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALIND 220
            G+  +V   +  AVFA  T  ILL+ME LSAFLHALRLHWVEFQNKFY GDGYKF PFSF  I D
Sbjct:  771 GWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKFSPFSFKHILD 835          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP2_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens GN=ATP6V0A2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.660e-15
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 2
Query:   38 LVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALINDE 223
            +++ L  +A+FA  T FILL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF+L++ +
Sbjct:  787 VLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLSSK 848          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP2_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus GN=Atp6v0a2 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.307e-14
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 2
Query:   38 LVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALINDE 223
            +++ L  +A FA  T FILL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF+L++ +
Sbjct:  787 VLLLLPVMAFFAVLTIFILLVMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLSSK 848          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP4_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.706e-14
Identity = 41/60 (68.33%), Postives = 44/60 (73.33%), Query Frame = 2
Query:   26 GYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSF 205
            G+  LV   +  AVFA  T  ILL+ME LSAFLHALRLHWVEFQNKFY G G KF PFSF
Sbjct:  764 GWAGLVGVFIIFAVFAVLTVAILLVMEGLSAFLHALRLHWVEFQNKFYEGAGSKFSPFSF 823          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP2_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus GN=ATP6V0A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.706e-14
Identity = 39/62 (62.90%), Postives = 48/62 (77.42%), Query Frame = 2
Query:   38 LVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALINDE 223
            +++ L  +A FA  T FILL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF L++ +
Sbjct:  787 VLVLLPVIAFFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFRLLSSK 848          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP3_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens GN=TCIRG1 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 2.229e-14
Identity = 38/53 (71.70%), Postives = 41/53 (77.36%), Query Frame = 2
Query:   62 AVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALIND 220
            A FA  T  ILL+ME LSAFLHALRLHWVEFQNKFY G GYK  PF+FA  +D
Sbjct:  778 AAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFAATDD 830          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP1_PONAB (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.911e-14
Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 2
Query:   56 GLAVFAFATAF------ILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALIND 220
            GL +F F TAF      ILL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF  I +
Sbjct:  772 GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP1_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 2.911e-14
Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 2
Query:   56 GLAVFAFATAF------ILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALIND 220
            GL +F F TAF      ILL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF  I +
Sbjct:  772 GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VPP1_CAEEL (Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.965e-14
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 2
Query:   26 GYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALINDEE 226
            GY   +   +   +F   + FIL++ME LSAFLHALRLHWVEFQ+KFY G GY+F PFSF  I  EE
Sbjct:  832 GYTGAIATYILFFIFGSLSVFILVLMEGLSAFLHALRLHWVEFQSKFYGGLGYEFAPFSFEKILAEE 898          
BLAST of EY683908 vs. ExPASy Swiss-Prot
Match: VATM_DICDI (Vacuolar proton translocating ATPase 100 kDa subunit OS=Dictyostelium discoideum GN=vatM PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.965e-14
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 2
Query:    2 EKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFALINDEED 229
            E++L+      N  +  VG   +  A+  +LL+ME+LSAFLHALRLHWVEFQNKFY GDG +F P+S   I  E+D
Sbjct:  739 ERILIGQVERGNPFLAFVGFGAWLGASVAVLLLMESLSAFLHALRLHWVEFQNKFYIGDGVRFIPYSATRILSEDD 814          
The following BLAST results are available for this feature:
BLAST of EY683908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
VPP4_HUMAN2.381e-1667.69V-type proton ATPase 116 kDa subunit a isoform 4 O... [more]
VPP2_HUMAN7.660e-1562.90V-type proton ATPase 116 kDa subunit a isoform 2 O... [more]
VPP2_MOUSE1.307e-1462.90V-type proton ATPase 116 kDa subunit a isoform 2 O... [more]
VPP4_MOUSE1.706e-1468.33V-type proton ATPase 116 kDa subunit a isoform 4 O... [more]
VPP2_BOVIN1.706e-1462.90V-type proton ATPase 116 kDa subunit a isoform 2 O... [more]
VPP3_HUMAN2.229e-1471.70V-type proton ATPase 116 kDa subunit a isoform 3 O... [more]
VPP1_PONAB2.911e-1467.21V-type proton ATPase 116 kDa subunit a isoform 1 O... [more]
VPP1_HUMAN2.911e-1467.21V-type proton ATPase 116 kDa subunit a isoform 1 O... [more]
VPP1_CAEEL4.965e-1456.72Probable V-type proton ATPase 116 kDa subunit a OS... [more]
VATM_DICDI4.965e-1451.32Vacuolar proton translocating ATPase 100 kDa subun... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-A05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683908 ID=EY683908; Name=EY683908; organism=Citrus sinensis; type=EST; length=1001bp
TGAGAAAGTCCTCCTCCTTGCCTGGGGGTATGATAACCTTGTTATCCGGT
TAGTGGGGCTGGCAGTTTTTGCCTTTGCCACTGCTTTCATATTGCTCATG
ATGGAGACTCTCAGTGCTTTCTTACATGCATTGCGTCTTCATTGGGTGGA
ATTCCAAAACAAATTCTACCATGGGGATGGCTACAAGTTCAGACCTTTCT
CGTTTGCCTTAATAAATGATGAGGAAGATTAGGTTTATCATATATCCTTC
AGTTTTTGGAATTTTTTTTTTCTTGAGAAAGAAACGGAGGCAGATATATG
TTCAAATTTGGAAGCCACTTAAGATGGACATCGATTAGAATGCCATTGTT
GCTGGCTGAGGATCGTTTGCTCTAATATTAGCTGTCGCTGGCTGAGGATT
GTTTGCTCTAATATTAGCACCACTTTGACTTAGGAACATGGAATCATGGC
TCATTCTCTGGAGGTTCTGGTAAAAAAGAATTTCTGCTTCAGTCATGTTA
AGCTATTATCATAGAAGTTTGTATTTTTTTATTTTTAATTATTATTTTGC
ACAAATGAGAAAAAAGAAAAGAGCAAAGGGAGGGGAAGTTATTACTGTAA
AGATGAACTGGCAGCCGTTATACCATGTAGCCCTTTTTGTTGGACTGGGA
ATTAGATCTATAGTTTTTACCACAAACCCCCTTGCTACCATGGACTCCCC
GGAATTTGAACCCTTATTTTAACTTAAAATTTTGTCTTAATCTAATGAAA
CTATCCATTCGTCCATTATACCGCTTATTTTACCGAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGGGGGGCCCCCTCAAAAAGGAACCAAACTTAACATT
AACCCGGGCTTGCAGACCTCATAACTTCTTTTTATAAGTGGGCCCCCTAA
AATTTTATTTACCCGGGGACGGCCTTTTTTTTAAAAGCCCCCCGGGGGTC
GGGGGAAAAACCCCCGTGGCAAGTCACCCACCAATTATAAAAAACCCCCT
T
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