EY709666

Overview
NameEY709666
Unique NameEY709666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY709666 vs. ExPASy Swiss-Prot
Match: GLGB_FELCA (1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 2
Query:   98 YCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLS 274
            Y    VD+DAL+YL+LAN ++H L+PN ITIAED +  P LC P +QGG+GFDY L ++
Sbjct:  377 YFGLQVDEDALIYLMLANHLVHTLYPNSITIAEDVSGMPALCSPISQGGVGFDYRLAMA 435          
BLAST of EY709666 vs. ExPASy Swiss-Prot
Match: GLGB_MOUSE (1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 2
Query:   98 YCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLS 274
            Y    VD+DAL+YL+LAN + H L+P+ ITIAED +  P LC PT+QGG GFDY L ++
Sbjct:  380 YFGLQVDEDALIYLMLANHLAHTLYPDSITIAEDVSGMPALCSPTSQGGGGFDYRLAMA 438          
BLAST of EY709666 vs. ExPASy Swiss-Prot
Match: GLGB_GLOIN (1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 2
Query:   98 YCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEM 286
            Y    VD+  ++YL+LAN++LH L+P IIT++ED +  PGLC P  +GG+GFDY L ++  +M
Sbjct:  365 YFGDTVDEGGVVYLMLANDMLHKLYPRIITVSEDVSGMPGLCLPVEEGGIGFDYRLAMAIPDM 427          
BLAST of EY709666 vs. ExPASy Swiss-Prot
Match: GLGB_ASPOR (1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae GN=gbeA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:   98 YCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMRLANTQE 307
            Y    VD++ ++YL LANE+LH L+PN IT+AED +  P LC P + GG+GFDY L ++  +M +   +E
Sbjct:  368 YFGSSVDEEGVMYLTLANEMLHNLYPNCITVAEDVSGMPALCLPHSLGGVGFDYRLAMAVPDMYIKLLKE 437          
BLAST of EY709666 vs. ExPASy Swiss-Prot
Match: GLGB_CRYNE (1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans GN=GLC3 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 2
Query:   98 YCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEM 286
            Y    VD +A++YL+LAN +LH  +P+++TIAED +  P LC P  +GG+GFDY L+++  +M
Sbjct:  365 YFGDSVDLEAMVYLMLANAMLHETYPHVVTIAEDVSGMPTLCRPVAEGGVGFDYRLSMAIPDM 427          
BLAST of EY709666 vs. ExPASy Swiss-Prot
Match: GLGB_HORSE (1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 2
Query:   98 YCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLS 274
            Y    VD+DAL YL+LAN ++H L+P+ ITIAED +  P LC P +QGG GFDY L ++
Sbjct:  377 YFGLQVDEDALTYLMLANHLVHTLYPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMA 435          
The following BLAST results are available for this feature:
BLAST of EY709666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GLGB_FELCA9.660e-1355.931,4-alpha-glucan-branching enzyme OS=Felis catus G... [more]
GLGB_MOUSE4.794e-1255.931,4-alpha-glucan-branching enzyme OS=Mus musculus ... [more]
GLGB_GLOIN1.395e-1147.621,4-alpha-glucan-branching enzyme OS=Glomus intrar... [more]
GLGB_ASPOR1.822e-1145.711,4-alpha-glucan-branching enzyme OS=Aspergillus o... [more]
GLGB_CRYNE2.379e-1146.031,4-alpha-glucan-branching enzyme OS=Cryptococcus ... [more]
GLGB_HORSE3.108e-1154.241,4-alpha-glucan-branching enzyme OS=Equus caballu... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-096-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709666 ID=EY709666; Name=EY709666; organism=Citrus sinensis; type=EST; length=732bp
TCNGNNATCCTTGGTCGACCACGCGTCCGGTTTGCTCTGTAAACTTTATT
GCAACCAGTTCAATGTTCATTTCAACATGAAGTGTTCTTGTTGCAGGTAC
TGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTGGCAAA
TGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGAAGATG
CAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGATTGGGA
TTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGCGGTTGGCGAACAC
ACAAGAAACTGCTAGGCAGGGAGGAGAAGGGCAACACCAAAGCCACTAGA
ATAGGGGCAGGGGGGGACGTTGTAAGATACAGAGGAGGTTGGGAGGGAGT
GTGGAAGGAGCTAAGAATGGCGTGTAACTAACCGATCGAAAAAAAAACTA
CCCACACACGCAAACGGCGCCGGATGCCCGGCAGTACCCCAGCCTGCCGG
GCCCCCCCCCGGCCCCCCACCCACAAGAATAACACAACGAGCGCGGGAAA
TATTATATGCTCTCGTGCACGCCCCACGGCTCCAGCAGGTCCCCACATCC
TACCAACTCGCCCTCCGCCCCCCAGCCCCGCCGCTCCTTCCCAGCCATAA
CACACACACCAACAGACACAAACAACAACCACCAGCCCTCCCTCCCGCCT
CCCCCCCCCGACCCCTCGCCCGGCGATACCCA
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