EY709638

Overview
NameEY709638
Unique NameEY709638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY709638 vs. ExPASy Swiss-Prot
Match: Y4648_ARATH (Uncharacterized protein At4g26480 OS=Arabidopsis thaliana GN=At4g26480 PE=4 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.633e-45
Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 1
Query:  181 EKWIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAG--FHGKEEDDEVIRMHMSLVEGFFKNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLNCVEFRKEDYPRYSNKKGAGS-LGDDIFPL 753
            EKWI HYSS H+ILLVGEG+FSFS  L+  FGSA NI A+SLDS + +  K+ +A  N++ LK+ G  I H VD   M   + LS +++DRI+FNFPHAG  F G+E     I  H  LV GF +NA  ML   GE+H++HKTT PF  W I++L +   L  L   +F    YP Y  K+G+G    DD FP+
Sbjct:    5 EKWIRHYSSTHKILLVGEGNFSFSLCLASAFGSAMNITATSLDSEDELSIKYMDAVDNINILKRYGCDIQHEVDVHTMSFDNSLSLQRYDRIVFNFPHAGSRFFGRELSSRAIESHKELVRGFLENAKEMLEEDGEIHITHKTTYPFSDWGIKKLGKGEGLKLLKKSKFELSHYPGYITKRGSGGRRSDDYFPV 198          
BLAST of EY709638 vs. ExPASy Swiss-Prot
Match: YC6D_SCHPO (UPF0617 protein C1919.13c OS=Schizosaccharomyces pombe GN=SPCC1919.13c PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.652e-23
Identity = 56/189 (29.63%), Postives = 108/189 (57.14%), Query Frame = 1
Query:  163 KDEKEEEKWIMHYSSKHQILLVGEGDFSFSFALSQKFGSASN-ICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFKNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLNCVEFRKEDYPRYSNKKGAG 726
            K++   E++++ +   ++ LL+GEG+FSF+F+L     S+   + A+S DS E + +K+ +A   +  ++  G  ++H +DAT++  H +L  +KFD I +NFPH+G  G ++ D  I  +  ++  FFK +  +L  +G + ++   T P+  W+++ LA+      L   +F    YP YS+++  G
Sbjct:   42 KNKGPTERYVLPFEKNNRFLLLGEGNFSFAFSLLLHHVSSEGFVLATSYDSKEDLKQKYPDAAEYISKIEINGGKVMHEIDATKLHLHKKLKTQKFDTIFWNFPHSG-KGIKDQDRNILDNQKMLLAFFKASKFLLSEKGVIVITLAETKPYTLWNLKGLAKDAGYTSLMTEKFDSSFYPEYSHRRTIG 229          
BLAST of EY709638 vs. ExPASy Swiss-Prot
Match: FDXA1_HUMAN (Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens GN=FDXACB1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.559e-13
Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 1
Query:  214 QILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFKNASGMLRPRGEVHVS 594
            ++LLVGEG+FSF+ ALS+    ++ + A+ L     + +    A  NL  L++ G  +  GVD T++ +  EL +R+FD+I FNFPH G          +  +  L+  FF++ + +L   GEVHV+
Sbjct:    5 RLLLVGEGNFSFAAALSETLDQSTQLTATCLQRPAELARD-PLAWENLQCLRERGIDVRFGVDCTQLADVFELHEREFDQIYFNFPHCGRKAG------VAKNRELLAKFFQSCADVLAEEGEVHVA 124          
The following BLAST results are available for this feature:
BLAST of EY709638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y4648_ARATH9.633e-4547.94Uncharacterized protein At4g26480 OS=Arabidopsis t... [more]
YC6D_SCHPO4.652e-2329.63UPF0617 protein C1919.13c OS=Schizosaccharomyces p... [more]
FDXA1_HUMAN2.559e-1334.65Ferredoxin-fold anticodon-binding domain-containin... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-048-E08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY709638 ID=EY709638; Name=EY709638; organism=Citrus sinensis; type=EST; length=861bp
CCACGCGTCCGCAAACATTTCACTATTTCAGTACCTTAATCTCACTGTCA
AGTGCTCAACTCTCTCTGTATTAAACACACCAACCCTTGAATCTCGATGG
CAAAAGTAGTAGTGGGTATGGCTGCTAAAGGAGAACAGAAAAAAGAAATG
AGTTTTACAGAAAAAGATGAAAAAGAAGAAGAGAAATGGATCATGCATTA
TTCATCAAAGCATCAAATACTGTTGGTGGGTGAAGGAGATTTCTCGTTTT
CTTTTGCTTTATCGCAGAAATTTGGATCTGCTTCTAACATCTGCGCTTCT
TCTCTTGATTCCTATGAAACTGTGGTTAAGAAATTCAAGGAGGCACGGTC
AAATTTGGACACCCTAAAGAAGCTGGGAGCATCCATTATCCATGGAGTTG
ATGCAACTGAAATGAAGGAACATTCTGAATTGAGCAAGCGGAAGTTTGAT
AGAATAATCTTCAACTTCCCCCATGCTGGCTTTCATGGAAAGGAAGAAGA
CGACGAAGTTATTCGAATGCATATGAGCCTCGTGGAAGGTTTCTTCAAAA
ATGCAAGTGGTATGCTAAGGCCTCGTGGTGAAGTTCATGTAAGCCACAAA
ACAACAGCTCCATTTTGCAAATGGCATATCGAGGAACTCGCTAGGAAACA
CTCTTTGTTAAGACTCAACTGTGTGGAGTTTAGAAAAGAAGACTACCCCA
GGTACAGTAACAAGAAAGGAGCTGGTTCACTGGGCGATGATATTTTCCCC
TTGGAAAAGGCCGTACCTTCCAATTTGGTTAATATCTGCTCCCAAGGGGC
TTAAAAATGAATGATGGGGGATTTATTGCCAAAAACTAAAGGTGATCAAA
AATTGCAATCC
back to top