EY683395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683395 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.739e-46 Identity = 100/190 (52.63%), Postives = 119/190 (62.63%), Query Frame = 3 Query: 297 LQMMSGNAFTIPSSLGGFVHQEXXXXXXXXXXXXXXXXX----------------RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVFQKKVYICPKKTCVHHEPSRGSRVI*GGKRSLLAENMGKKNGKCEKMFXKNMPFHSDWKAPPQDWGPPKNYK 818 +QM+ G+ F+I SS+GGFVHQE RN PGTPDPDA+VIALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR+ ++V +KKVYICP KTCVHH+ SR + G K+ + G+K KCEK K SDWKA + G + YK Sbjct: 1 MQMIPGDPFSISSSMGGFVHQETHLHHLQQQIPDLNPNSNPNPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKH-YSRKHGEKKWKCEKC-SKKYAVQSDWKAHAKTCG-TREYK 187
BLAST of EY683395 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.208e-41 Identity = 83/129 (64.34%), Postives = 100/129 (77.52%), Query Frame = 3 Query: 414 RNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVFQKKVYICPKKTCVHHEPSRGSRVI*GGKRSLLAENMGKKNGKCEKMFXKNMPFHSDWKAPPQDWG 800 RNLPG PDP+AEVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QRT+K+V +K+VY+CP+K+CVHH P+R + G K+ ++ G+K KCEK K SDWKA + G Sbjct: 44 RNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKH-GEKKWKCEKC-AKRYAVQSDWKAHSKTCG 169
BLAST of EY683395 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.278e-40 Identity = 88/164 (53.66%), Postives = 105/164 (64.02%), Query Frame = 3 Query: 309 SGNAFTIPSSLGGFVHQEXXXXXXXXXXXXXXXXXRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVFQKKVYICPKKTCVHHEPSRGSRVI*GGKRSLLAENMGKKNGKCEKMFXKNMPFHSDWKAPPQDWG 800 SG+ F P S H E RNLPG PDP+AEVIALSP TLMATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QRT+K+V +K+VY+CP+KTCVHH SR + G K+ ++ G+K CEK K SDWKA + G Sbjct: 11 SGSGFAQPQSSSTLDHDESLINPPLVKKK------RNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEV-RKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKH-GEKKWTCEKC-AKRYAVQSDWKAHSKTCG 165 The following BLAST results are available for this feature:
BLAST of EY683395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY683395 ID=EY683395; Name=EY683395; organism=Citrus sinensis; type=EST; length=822bpback to top |