EY682406

Overview
NameEY682406
Unique NameEY682406
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 1.972e-70
Identity = 127/161 (78.88%), Postives = 141/161 (87.58%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            VEI G+ AGR+V+GLFGKAVP+TAENFRALCTGEKG+GKSGKPLHYKGS FHRIIPSFM+Q            ESIYG+KF DENFKLKHTGP +LSMAN+G DTNGSQFFITTVTTSWLDG HVVFGKV+ GMDVVYK+EAEG+Q+GTPKSKVV+ADSGE
Sbjct:   38 VEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGE 198          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.670e-69
Identity = 129/161 (80.12%), Postives = 137/161 (85.09%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            VEI G+ AGRIVMGLFGK VP+T ENFRALCTGEKGIGK+GK LHYKGS+FHRIIPSFMLQ            ESIYGEKF DENFKLKHTGP  LSMANAG DTNGSQFFITTVTTSWLDG HVVFGKV++GMDVVYKVEAEG Q+GTPKSKVV+ DSGE
Sbjct:   41 VEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGE 201          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 2.417e-60
Identity = 108/161 (67.08%), Postives = 128/161 (79.50%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            + IAG+P GRIVM L+   VP+TAENFRALCTGEKG+GKSGKPLH+KGS FHRIIP FM+Q            ESIYGEKFPDENFK KHTGP +LSMANAGP+TNGSQFF+ TV T+WLDG HVVFG+V+ G+D+V KVE  G  +GTPKS+ ++AD G+
Sbjct:   10 ITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQ 170          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.266e-57
Identity = 105/161 (65.22%), Postives = 125/161 (77.64%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            +EI  +PAGRIV GL+GK VP+T ENFRALCTGEKG+G SGKPLHYK S FHRIIP+FM+Q            ESIYG+KF DENFK+KH+ P LLSMANAGP+TNGSQFFITTV TSWLDG H VFG+V+ GMD+V  +E+ G Q+GTP     +++SGE
Sbjct:   36 IEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGE 196          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            + I G+ +GRIVM L+   VP+TA NFRALCTGE GIGKSGKPLH+KGS FHRIIP+FM+Q            ESIYGEKFPDENFK KHTGP +LSMANAGP+TNGSQFF+ TV T WLDG HVVFG+V+ G+DVV  VE+ G Q+G P    ++AD G+
Sbjct:   10 ITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQ 170          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.982e-54
Identity = 103/159 (64.78%), Postives = 116/159 (72.96%), Query Frame = 2
Query:    8 IAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            + G PAGRIVM L+   VP+TAENFRALCTGEKG+GKSGKPLHYKGSTFHR+IP FM Q            ESIYGEKFPDE F  K   P +LSMANAGP+TNGSQFFI TV T WLDG HVVFG+V+ GMDVV  +E  G +NG+    V VAD G+
Sbjct:   12 VGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQ 170          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.380e-54
Identity = 102/159 (64.15%), Postives = 114/159 (71.70%), Query Frame = 2
Query:    8 IAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            I G PAGR+VM LF    P+TAENFRALCTGEKG+GK GKPLHYKGSTFHR+IP FM Q            ESIYG KF DENF  KHTGP +LSMANAGP TNGSQFFI T  T WL+G HVVFG+V+ GMDV+ K EA G  +G     VV+AD G+
Sbjct:   12 IGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQ 170          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 5.766e-54
Identity = 101/161 (62.73%), Postives = 120/161 (74.53%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            + I G+  GRIVM L+   VP+TAENFRALCTGEKG GKSGK LH+KGS FHRIIP FM+Q            ESI+GEKF DENFK KHTGP +LSMAN G +TNGSQFF+ TV T+WLDG HVVFGKV+ GMDVV  +E++G ++G P +  V+AD GE
Sbjct:   10 ITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGE 170          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.530e-54
Identity = 102/161 (63.35%), Postives = 115/161 (71.43%), Query Frame = 2
Query:    2 VEIAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            + + G+PAGRIVM LF    PRTAENFRALCTGEKG G+SGKPLHYK S+FHR+IP FM Q            ESIYG KF DENF  KHTGP +LSMANAGP+TNGSQFFI T  T WLDG HVVFG+V+ GMDVV  +E  G  +G    KVVV D G+
Sbjct:   10 MSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQ 170          
BLAST of EY682406 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53
Identity = 100/159 (62.89%), Postives = 118/159 (74.21%), Query Frame = 2
Query:    8 IAGEPAGRIVMGLFGKAVPRTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPRLLSMANAGPDTNGSQFFITTVTTSWLDGTHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 484
            I G PAG+IVM L+    P+TAENFRALCTGEKG+G+SGKPLH+KGS+FHR+IP+FM Q            ESIYG KF DENF+ KHTGP +LSMANAG +TNGSQFFI TV T WLDG HVVFG+V+ G+DVV  +E  G  +G P   VV+AD GE
Sbjct:   13 IGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGE 171          
The following BLAST results are available for this feature:
BLAST of EY682406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CP19D_ARATH1.972e-7078.88Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
CP20A_ARATH1.670e-6980.12Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
CYP7_CAEEL2.417e-6067.08Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIB_DICDI3.266e-5765.22Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYP3_CAEEL1.051e-5563.98Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYPH_MAIZE1.982e-5464.78Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CYPH_SOLLC3.380e-5464.15Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYP2_CAEEL5.766e-5462.73Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYPH_CATRO7.530e-5463.35Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CP19B_ARATH1.284e-5362.89Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-032-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY682406 ID=EY682406; Name=EY682406; organism=Citrus sinensis; type=EST; length=677bp
CGTTGAGATTGCTGGAGAACCTGCCGGACGTATTGTAATGGGTCTCTTTG
GAAAGGCAGTCCCTAGAACTGCAGAAAATTTCCGAGCTTTGTGCACAGGG
GAGAAAGGGATTGGCAAGAGCGGGAAGCCACTCCACTACAAGGGAAGTAC
GTTCCATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTCACTC
TTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCCTGAC
GAAAATTTCAAACTGAAGCACACTGGCCCAAGGCTTTTGTCAATGGCAAA
TGCTGGTCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTGACAA
CTAGCTGGTTGGATGGCACGCATGTTGTATTTGGAAAGGTGCTATCGGGG
ATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGCACTCC
GAAGAGCAAAGTCGTCGTTGCAGACAGCGGTGAACTTCCTCTGTGATTTC
CCCCATAATTATATAATTACGCTATACACCTTTTTAGTCCTCTCGTCTTT
TCGACCTTCATGAAAATACTCATAATTTGCCTATTTATCATGTAAGATAC
ATTTTAAAATGTCCTAAGTTGTTTGCCAGGCTGGTGCTTCTTTTTAGGGG
AACCTTTTCTCTGAAACAAAAAAAAAA
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