EY682379

Overview
NameEY682379
Unique NameEY682379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY682379 vs. ExPASy Swiss-Prot
Match: N4BP2_HUMAN (NEDD4-binding protein 2 OS=Homo sapiens GN=N4BP2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.637e-12
Identity = 49/156 (31.41%), Postives = 80/156 (51.28%), Query Frame = 2 
Query:    5 RPEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMQMKAAHGKAQESIYRQRNPVELQGNGRGQDRMIDLHGLHVSEAIHVLKHELSVLRSTARAAGQRLQVYICVGTGHHTRGSRTPVRLPIAVQRYLLEEEGLDYTEPQPGLLRVVI 472
            R EA  H + R   + +A++AY IG K +A   + +G LH  +MK A+  A   I+ + N   L  N      ++DLHGLHV EA+  L   L       +  G +  + +  G G+H++G     R+  AV +YL+      ++E +PG L+V++
Sbjct: 1623 RAEAFLHQQKRMECYSKAKEAYRIGKKNVATFYAQQGTLHEQKMKEANHLAAIEIFEKVNASLLPQN------VLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGNHSQGG--VARIKPAVIKYLI-SHSFRFSEIKPGCLKVML 1769
The following BLAST results are available for this feature:
BLAST of EY682379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
N4BP2_HUMAN7.637e-1231.41NEDD4-binding protein 2 OS=Homo sapiens GN=N4BP2 P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-032-C03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY682379 ID=EY682379; Name=EY682379; organism=Citrus sinensis; type=EST; length=820bp
CACGCGTCCGGAAGCTCGTGACCATGCCCGTCTACGTAATGCATACTTTG
AACAGGCACGTCAAGCATATCTGATAGGAAATAAGGCCCTAGCAAAGGAA
CTGAGTGTGAAAGGACAGCTGCATAATATGCAAATGAAGGCAGCTCATGG
GAAGGCTCAAGAATCTATATATCGCCAAAGGAACCCAGTTGAGTTGCAAG
GCAATGGGAGAGGACAGGATCGGATGATAGACCTGCACGGGCTTCATGTA
AGTGAAGCAATTCACGTTCTCAAGCATGAATTGAGTGTTCTGAGGAGCAC
AGCCCGTGCGGCCGGTCAGCGTCTGCAGGTTTATATATGTGTTGGAACAG
GACACCACACTAGGGGTTCCAGAACTCCGGTAAGACTTCCAATTGCTGTA
CAGCGTTACCTGCTCGAAGAAGAGGGCCTTGACTATACTGAACCGCAGCC
AGGGCTGCTTCGAGTTGTGATATATTGAGTCAATGACATGACAGCAAGGT
ATAGGAGTTTTTGACACCAACCATAATTCCATCAAGTCATAGTCATCTGA
ATCATTCTTGTATCTGTATATGGGAAGGGAGTGGAAAAGAAAGTAGTCAA
AGCCTGAAAAGGGAAAAAATGAAAAAAAAACAAAAAAAAATGAAAAAAGT
AACGGAAATTAGGGACCAGAGAGGTAAAAGAAAAGGAACCAAAAGTGTAT
CATTAAGGGTTAGTCCGTTTGACAGCCCCTTACATTTTGGTTACCACCAG
GGGGTAAAATTCAACCCGAACTTTTCAAACATTTTCCTTTTTCTTTTTTT
GTTAACCTTGGACCCCTAAA
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