EY681409

Overview
NameEY681409
Unique NameEY681409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY681409 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSJ (Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.336e-16
Identity = 59/156 (37.82%), Postives = 82/156 (52.56%), Query Frame = 3
Query:   15 LYRPT-HDLVPCEDPICASLHAP--GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPR-LALGCGYNQ------VPGASYHPLDGILGLGKGKSSIVSQLHSQKLI-RNVVGHCXXXXXXXXXXXXXXXXXXXRVVWTSMSSDY 449
            LY+PT   LV C D +C  L+        C    QCDY ++Y D  SS+GVLV D F+ + +NG   NP  +A GCGY+Q      VP     P+D ILGL +GK +++SQL SQ +I ++V+GHC                    V WT M+ ++
Sbjct:   80 LYKPTPKKLVTCADSLCTDLYTDLGKPKRCGSQKQCDYVIQYVDS-SSMGVLVIDRFSLSASNGT--NPTTIAFGCGYDQGKKNRNVP----IPVDSILGLSRGKVTLLSQLKSQGVITKHVLGHCISSKGGGFLFFGDAQVPTSGVTWTPMNREH 228          

HSP 2 Score: 20.4014 bits (41), Expect = 1.336e-16
Identity = 8/12 (66.67%), Postives = 8/12 (66.67%), Query Frame = 2
Query:  557 KYYSPGVAELFF 592
            KYYSPG   L F
Sbjct:  229 KYYSPGHGTLHF 240          
BLAST of EY681409 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSI (Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   15 LYRPTHDL-VPCEDPICASLHAPGHH--NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPR-LALGCGYNQVPGASYH----PLDGILGLGKGKSSIVSQLHSQKLI-RNVVGHCXXXXXXXXXXXXXXXXXXXRVVWTSMSSDY 449
            LY+P     V C +  CA L+A       C    QC Y ++Y  GGSS+GVL+ D+F+   +NG   NP  +A GCGYNQ  G + H    P++GILGLG+GK +++SQL SQ +I ++V+GHC                    V W+ M+ ++
Sbjct:   80 LYKPELKYAVKCTEQRCADLYADLRKPMKCGPKNQCHYGIQYV-GGSSIGVLIVDSFSLPASNGT--NPTSIAFGCGYNQ--GKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLGHCISSKGKGFLFFGDAKVPTSGVTWSPMNREH 228          
The following BLAST results are available for this feature:
BLAST of EY681409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP1_ORYSJ1.336e-1637.82Aspartic proteinase Asp1 OS=Oryza sativa subsp. ja... [more]
ASP1_ORYSI3.913e-1637.66Aspartic proteinase Asp1 OS=Oryza sativa subsp. in... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-021-F10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY681409 ID=EY681409; Name=EY681409; organism=Citrus sinensis; type=EST; length=821bp
CCACGCGTCCGCCGCTTTACAGACCAACCCATGACCTTGTGCCTTGCGAG
GACCCCATTTGTGCATCCTTGCATGCACCTGGTCACCACAATTGTGAAGA
CCCTGCACAATGTGACTATGAGCTTGAATATGCAGATGGTGGCTCGTCTC
TTGGTGTTCTTGTCAAGGATGCTTTTGCCTTCAACTATACGAATGGCCAA
CGACTTAATCCTCGTCTAGCCCTCGGATGTGGATATAATCAAGTTCCAGG
TGCATCTTATCATCCCTTGGATGGGATACTTGGCCTTGGCAAGGGGAAAT
CCAGCATTGTTTCGCAGCTTCATAGCCAGAAGTTAATACGAAATGTCGTT
GGACACTGTTTAAGTGGAGGGGGTGGAGGATTTCTCTTCTTTGGAGATGA
CCTCTATGATTCTTCTCGAGTAGTTTGGACTTCAATGTCATCTGATTATA
CGTAATTGACCCTCCCATACCCCCAGTGTTCAAATTTATTAGTCTTATTA
TCAATATTTTGGTTGTTCCTCTGCTCATTTTACCTCCTCTAATTCTTGAT
TTCAGCAAATACTACTCACCTGGAGTTGCAGAACTCTTTTTTTGGTGGGG
AAACTACTGGTTTAAAGAATCTACCTGTGGTTTTTGACAGTGGGAGCTTC
TAAACCTTACCTTTATCGTGGTACTTTATCAACTTTTACCTCCTATAGTG
AGTCTGAAAAAACCAAAAATTAACCCTTCCTTATCATTTAAGAATTCTTT
TGTTTGGTTAAAAAAAAATTTTTTAAATAAATTTAATGGGGCCCCAAATT
TTATAAAATTCAGGGGGATAA
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