EY681396

Overview
NameEY681396
Unique NameEY681396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: RRP44_CAEEL (Probable exosome complex exonuclease RRP44 OS=Caenorhabditis elegans GN=dis-3 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.796e-58
Identity = 111/225 (49.33%), Postives = 155/225 (68.89%), Query Frame = 1
Query:    1 SNQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGD-DPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEARIVKIRSNGFIVFVPKFGIKGPVYLTQRGQKG 672
            ++ MVEEFML AN+SVAE+IL ++P C+LLRRHP P KE  +PL+  A   G  + V S K LADSL+R V   +P  N+L+R+L TRCMTQAVYF +G +  P++ H+GLA  +YTHFTSPIRRYADV+VHRLL+A++G   + S   ++ + T I  N+NYRH+ AQ A R SV+L+ + YF+ +    E  ++ +R+NG  VFVPK+G++  + L      G
Sbjct:  671 THSMVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARHRGFEIIVESGKGLADSLNRCVDKKNPMLNRLLRMLTTRCMTQAVYFSAGTVPVPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNINYRHKQAQYAGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIVLQTSAASG 895          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: RRP44_MOUSE (Exosome complex exonuclease RRP44 OS=Mus musculus GN=Dis3 PE=2 SV=4)

HSP 1 Score: 217.624 bits (553), Expect = 6.389e-56
Identity = 110/222 (49.55%), Postives = 153/222 (68.92%), Query Frame = 1
Query:    1 SNQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGDD-PYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFR-KRPTDTEARIVKIRSNGFIVFVPKFGIKGPVYLTQR 660
            +N MVEEFML AN+SVA++I  +F   +LLR+HP+P     + L++ A +  L +   ++K+LADSLDRA   D PY N L+RILATRCM QAVYFCSG     +FHHYGLA+P+YTHFTSPIRRYAD++VHRLL+ ++G         D+ +L+ I  NLN+RH+ AQ A R SV  HT ++F+ K     EA I+ +R N  +V +PK+G++G V+  ++
Sbjct:  659 TNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVKAAKSKNLQIKTDTAKSLADSLDRAESPDFPYLNTLLRILATRCMMQAVYFCSG--MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTYPELTDKHKLSDICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEK 878          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: RRP44_HUMAN (Exosome complex exonuclease RRP44 OS=Homo sapiens GN=DIS3 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.055e-54
Identity = 109/222 (49.10%), Postives = 151/222 (68.02%), Query Frame = 1
Query:    1 SNQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGDD-PYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFR-KRPTDTEARIVKIRSNGFIVFVPKFGIKGPVYLTQR 660
            +N MVEEFML AN+SVA++I  +F   +LLR+HP+P     E L++ A +  L +   ++K+LA+SLD+A     PY N L+RILATRCM QAVYFCSG     +FHHYGLA+P+YTHFTSPIRRYADV+VHRLL+ ++G         D+ +L  I  NLN+RH+ AQ A R SV  HT ++F+ K     EA I+ +R N  +V +PK+G++G V+  ++
Sbjct:  659 TNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVYFCSG--MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEK 878          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: DIS3_SCHPO (Exosome complex exonuclease dis3 OS=Schizosaccharomyces pombe GN=dis3 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.272e-53
Identity = 105/220 (47.73%), Postives = 147/220 (66.82%), Query Frame = 1
Query:    1 SNQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTK---EMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGD-DPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEARIVKIRSNGFIVFVPKFGIKGPVY 648
            +N +VEEFML AN+SVA++I   FP  ++LRRH +P     + L+ +LR     G++L   +SK+LA SLD  V   +PYFN L+RIL TRCM  A YFCSG   PP+F HYGLA+P+YTHFTSPIRRYADV+ HR L+A++    +     D+ +L  I + +NYRHR AQMA R S+E +     +    + +A ++K+  NGF+VF+ +FG++G VY
Sbjct:  688 TNSLVEEFMLLANISVAQKIYDAFPQTAVLRRHAAPPLTNFDSLQDILRVCK--GMHLKCDTSKSLAKSLDECVDPKEPYFNTLLRILTTRCMLSAEYFCSGTFAPPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETINPSLSDKSRLIEICNGINYRHRMAQMAGRASIEYYVGQALKGGVAEEDAYVIKVFKNGFVVFIARFGLEGIVY 905          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: RRP44_YEAST (Exosome complex exonuclease DIS3 OS=Saccharomyces cerevisiae GN=DIS3 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.547e-52
Identity = 106/221 (47.96%), Postives = 145/221 (65.61%), Query Frame = 1
Query:    1 SNQMVEEFMLAANVSVAEQILRQFPLCSLLRRH---PSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVG-DDPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEARIVKIRSNGFIVFVPKFGIKGPVYL 651
            +N +VEEFML AN+SVA +I   FP  ++LRRH   PS   E+L  +L T   + ++L+  SSKALADSLDR V  +DPYFN L+RI++TRCM  A YF SG  + P+F HYGLA  +YTHFTSPIRRY DVV HR L+ ++G   L    +D+ ++  I  N+N +HRNAQ A R S+E +     R   +     ++K+ +NG +V VPKFG++G + L
Sbjct:  723 TNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLE--SSKALADSLDRCVDPEDPYFNTLVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFAGRASIEYYVGQVMRNNESTETGYVIKVFNNGIVVLVPKFGVEGLIRL 941          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: DI3L1_BOVIN (DIS3-like exonuclease 1 OS=Bos taurus GN=DIS3L PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 9.247e-47
Identity = 105/244 (43.03%), Postives = 146/244 (59.84%), Query Frame = 1
Query:    4 NQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVG-DDPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQD---RPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEAR------IVKIRSNGFIVFVPKFGIKGPVYLTQR-------GQKGNGDW 684
            ++ V E M+ AN  VA++I   FP  +LLRRHP P +E    L   A A G  +D  S+KALADSLD A   +DP  NKL+R +AT+ M+ A+YF +G     EFHHYGLA   YTHFTSPIRRY+D++VHRLL A++   K   + ++      L  +  ++N R+R AQ + + S EL   +YF+ +  +TE R      I  IR+NG +VF+P+FGIKG  YL  +       G  G+ +W
Sbjct:  678 HETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSELRECAKAKGFFIDTRSNKALADSLDNANDPNDPIVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDKKMEIQENLFSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVVSCGPDGHSEW 921          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: DI3L1_RAT (DIS3-like exonuclease 1 OS=Rattus norvegicus GN=Dis3l PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.060e-46
Identity = 105/244 (43.03%), Postives = 145/244 (59.43%), Query Frame = 1
Query:    4 NQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVG-DDPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQD---RPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEAR------IVKIRSNGFIVFVPKFGIKGPVYLTQR-------GQKGNGDW 684
            ++ V E M+ AN  VA++I   FP  +LLR+HP P +E    L   A A G  +D  S+K LADSLD A    DP  NKL+R +AT+ M+ A+YF +G     EFHHYGLA   YTHFTSPIRRY+D+VVHRLL A++   K   + ++      L  +  ++N R+R AQ + + S EL   +YF+ R  +TE R      I  IR+NG +VF+P+FGIKG  YL  +       G +G+ +W
Sbjct:  678 HETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSANDPSDPLVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKVEIKENLFSNKNLEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDPETEERCVVDGIIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVISCGPEGSSEW 921          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: DI3L1_MOUSE (DIS3-like exonuclease 1 OS=Mus musculus GN=Dis3l PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.060e-46
Identity = 105/244 (43.03%), Postives = 145/244 (59.43%), Query Frame = 1
Query:    4 NQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGD-DPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSVFQD---RPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEAR------IVKIRSNGFIVFVPKFGIKGPVYLTQR-------GQKGNGDW 684
            ++ V E M+ AN  VA++I   FP  +LLR+HP P +E    L   A A G  +D  S+K LADSLD A    DP  NKL+R +AT+ M+ A+YF +G     EFHHYGLA   YTHFTSPIRRY+D+VVHRLL A++   K   + ++      L  +  ++N R+R AQ + + S EL   +YF+ R  +TE R      I  IR+NG +VF+P+FGIKG  YL  +       G +G+ +W
Sbjct:  678 HETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSANDPKDPLVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKENLFSNKNLEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDAETEERCIADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDSLVISCGPEGSSEW 921          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: DI3L1_DANRE (DIS3-like exonuclease 1 OS=Danio rerio GN=dis3l PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.060e-46
Identity = 100/229 (43.67%), Postives = 147/229 (64.19%), Query Frame = 1
Query:    4 NQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGD-DPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPS---VFQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEAR------IVKIRSNGFIVFVPKFGIKGPVYLTQR 660
            ++ V E M+ AN  VA +I   FP  +LLR HP P +E    L+ +A A G ++D  S++ALADSL+RAV   DP  N+L+R++AT+ M+ A+YF +G     +++HYGLA   YTHFTSPIRRYADV+VHRLL A++ + K  S         +L  +A ++N ++R AQ + + S+EL   +YFR + + T+ R      I  +R+NGF+ FVP++G+KG VYL  R
Sbjct:  670 HETVAECMIYANHWVARKIQESFPHHALLRHHPPPKQEFFNHLIDSAKAHGFSIDTRSNRALADSLERAVDPRDPLVNRLLRMMATQAMSNALYFSTGSCPEEQYYHYGLALARYTHFTSPIRRYADVIVHRLLMAAVQLEKDESPSKALACNKELEELAQHINNKNRAAQHSQKQSIELFQCMYFRDKDSHTDERCVADAVIYAVRANGFLAFVPQYGLKGAVYLKDR 898          
BLAST of EY681396 vs. ExPASy Swiss-Prot
Match: DI3L1_PONAB (DIS3-like exonuclease 1 OS=Pongo abelii GN=DIS3L PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.130e-44
Identity = 101/229 (44.10%), Postives = 137/229 (59.83%), Query Frame = 1
Query:    4 NQMVEEFMLAANVSVAEQILRQFPLCSLLRRHPSPTKEMLEPLLRTAAAVGLNLDVSSSKALADSLDRAVGD-DPYFNKLIRILATRCMTQAVYFCSGDLTPPEFHHYGLAAPLYTHFTSPIRRYADVVVHRLLSASLGIYKLPSV---FQDRPQLTSIADNLNYRHRNAQMASRGSVELHTLIYFRKRPTDTEAR------IVKIRSNGFIVFVPKFGIKGPVYLTQR 660
            ++ V E M+ AN  VA++I   FP  +LLR+HP P +E    L   A A G  +D  S+K LADSLD A G  DP  N+L+R +AT+ M+ A+YF +G     EFHHYGLA   YTHFTSPIRRY+D+VVHRLL A++   K   +         L  +  ++N R+R AQ + + S EL   +YF+ +   TE R      I  IR+NG +VF+P+FGIKG  YL  +
Sbjct:  678 HETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNANGPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRANGVLVFIPRFGIKGAAYLKNK 906          
The following BLAST results are available for this feature:
BLAST of EY681396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
RRP44_CAEEL1.796e-5849.33Probable exosome complex exonuclease RRP44 OS=Caen... [more]
RRP44_MOUSE6.389e-5649.55Exosome complex exonuclease RRP44 OS=Mus musculus ... [more]
RRP44_HUMAN2.055e-5449.10Exosome complex exonuclease RRP44 OS=Homo sapiens ... [more]
DIS3_SCHPO2.272e-5347.73Exosome complex exonuclease dis3 OS=Schizosaccharo... [more]
RRP44_YEAST9.547e-5247.96Exosome complex exonuclease DIS3 OS=Saccharomyces ... [more]
DI3L1_BOVIN9.247e-4743.03DIS3-like exonuclease 1 OS=Bos taurus GN=DIS3L PE=... [more]
DI3L1_RAT2.060e-4643.03DIS3-like exonuclease 1 OS=Rattus norvegicus GN=Di... [more]
DI3L1_MOUSE2.060e-4643.03DIS3-like exonuclease 1 OS=Mus musculus GN=Dis3l P... [more]
DI3L1_DANRE2.060e-4643.67DIS3-like exonuclease 1 OS=Danio rerio GN=dis3l PE... [more]
DI3L1_PONAB1.130e-4444.10DIS3-like exonuclease 1 OS=Pongo abelii GN=DIS3L P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-021-E09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY681396 ID=EY681396; Name=EY681396; organism=Citrus sinensis; type=EST; length=806bp
AGCAACCAAATGGTTGAGGAGTTTATGCTTGCAGCTAATGTTTCAGTGGC
GGAACAAATCCTTAGACAATTCCCTCTTTGTTCACTTTTAAGGCGCCATC
CTTCTCCAACAAAAGAGATGCTCGAACCTTTGCTGCGTACTGCCGCTGCT
GTTGGTCTCAACTTAGATGTCTCATCATCGAAAGCACTGGCTGATTCACT
TGATCGTGCTGTGGGTGATGATCCATATTTTAATAAGCTGATTCGGATAT
TGGCTACTAGATGCATGACACAGGCGGTTTATTTCTGTAGCGGGGACCTC
ACTCCTCCAGAATTTCATCATTATGGTCTTGCAGCACCTCTATATACTCA
TTTCACCTCTCCTATAAGAAGATATGCAGATGTTGTTGTACACAGGTTGC
TTTCTGCATCTTTAGGTATTTACAAGCTCCCATCAGTATTCCAAGATAGA
CCCCAACTTACTAGCATAGCCGATAATCTGAATTATCGGCATAGGAATGC
CCAGATGGCAAGTCGGGGTTCAGTGGAGCTTCATACTCTCATCTACTTCA
GAAAACGGCCCACGGACACAGAGGCTAGAATAGTGAAGATCAGATCCAAC
GGTTTTATTGTCTTTGTGCCCAAGTTTGGCATAAAAGGACCTGTGTACTT
GACACAAAGAGGTCAGAAGGGAAACGGGGATTGGTATGTAAACAAGCAAC
ACCAAAAAATTGAAAAGAGGATGGAAATCTTTCCTAAAGTGTTTTAAAAA
AGGGAAACTTTCCCAGGAAGGTTGGGAAACCTCAACCAAACGGGCCAAAA
ACCCCA
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