EY744981

Overview
NameEY744981
Unique NameEY744981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length985
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744981 vs. ExPASy Swiss-Prot
Match: Y4598_ARATH (Uncharacterized membrane protein At4g06598 OS=Arabidopsis thaliana GN=At4g06598 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.373e-25
Identity = 58/131 (44.27%), Postives = 76/131 (58.02%), Query Frame = 3 
Query:    3 AVQKPREGSVHHQRTSSESFLMEEQPSWLDDLLNEPETPVXXXXXXXXXXXXFAYIDLVNASNLDYAAQDESRYKHLVSVPSW--GPQDIDYHKDTRHSPFYAELNSLKLKNRAWDNPINALPHPGNLPSA 389
            AVQK  EG+ +H RTSSESFL+EEQPSWLDDLLNEPETPV            FAY+D+    ++DY   D  RY +     +   GP++ DY + ++  PFY   +  K K R WD    +LP  G  P++
Sbjct:  218 AVQKLGEGNANHHRTSSESFLIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYVDVPVGFDVDYTLWDGGRYNNNNGFSNHVRGPKESDYLR-SQPVPFYPSAHLSKQKIRPWD----SLPDSGARPNS 343

HSP 2 Score: 38.1206 bits (87), Expect = 2.373e-25
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 2 
Query:  503 KSSSEKKDNSHAKASASDTETKRAKQTILLTVRRVQNFHT*LELERNGAIL 655
            KSS EK+DN  AK++ S+ +TKRA+Q       RV+      ELERN  +L
Sbjct:  384 KSSFEKRDNPLAKSATSEADTKRARQQFAQR-SRVRKIQYIAELERNVQML 433
The following BLAST results are available for this feature:
BLAST of EY744981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4598_ARATH2.373e-2544.27Uncharacterized membrane protein At4g06598 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-F05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744981 ID=EY744981; Name=EY744981; organism=Citrus sinensis; type=EST; length=985bp
AAGCAGTTCAAAAGCCCCGAGAGGGAAGTGTACACCATCAACGTACTTCC
TCGGAGAGCTTCCTAATGGAGGAGCAGCCTTCTTGGCTCGATGACCTCCT
TAATGAGCCTGAGACACCTGTACGCAGAGGAGGTCATCGGCGCTCATCAA
GTGATTCTTTTGCGTACATAGATTTAGTCAATGCTTCTAACTTAGATTAT
GCAGCTCAAGACGAGTCCAGATATAAACATTTGGTTTCTGTTCCTTCGTG
GGGACCTCAAGATATTGATTATCACAAGGACACTCGACATTCCCCTTTCT
ATGCTGAATTGAACTCTCTAAAGTTAAAGAATAGGGCATGGGACAATCCT
ATCAATGCTTTGCCTCATCCGGGTAACCTTCCTTCTGCCAGGGAGAATGT
TGTTCTGCAGAATTTGGGATCTCCAGCACAAGACGCAGATGGTGTTCCAT
CTACAACAAGTGAAAAGCTGGAGACAGCTGAAGCTGGTCCCACATGATTC
AAAAATCTTCCTCAGAGAAAAAGGATAATTCTCATGCTAAGGCTTCTGCT
TCTGACACTGAAACAAAACGTGCCAAACAAACAATTTTGCTCACCGTTCG
AAGGGTCCAAAACTTTCATACTTAGCTTGAATTGGAAAGGAATGGTGCAA
TCCTTTAAAGGCAGAAAGGTCATGAAGTTTCCGCCGAGTTTGAGTTTTCT
TACCAACAAAATCTTATTCTGGACGAGGGAAAAAAAACCCCCCGGAAAAC
AACCTCTTAAAAAGTTTCGGCCCCGGGCGCCATTTTATAAAATGCGTCGG
AAACATAGAAGCTTTTGGGGAGAGGGGAGACTAGAATGGGCGCACGGAAA
GGGGGATAAACCGCCAACGACGCAAACCACAGCCACGCCCGACCACATAA
CACCCCCTCCCCGAAAAGCACATCCACGACCCATACAGCGACAAACAACA
TCTATCAGACGACAAACAGACAATATACAAAAAAA
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