EY744976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_ORYSJ (DNA polymerase delta catalytic subunit OS=Oryza sativa subsp. japonica GN=POLD1 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.694e-86 Identity = 91/141 (64.54%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 277 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI--SNGTLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPGLSSSGMTPELSGSAPYFFPATKATADTA 693 IPID YYLENQISKPLLRIFEPILKNAS+ELL G HTR++SISTPSNSGIMKFAK+QL+C+GCKA+I SN TLC HCKG++ ELYCKTV V EL++LFG LWT C + G + S P F+ KA D A Sbjct: 955 IPIDPQYYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISGSNQTLCFHCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLC-TSRDCPIFYRRRKAQKDMA 1094 HSP 2 Score: 165.236 bits (417), Expect = 1.694e-86 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 3 Query: 12 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 VQYVK+TISDLLMNR+DLSLLVITKGLTKTG+DY VKAAHVELAERMRKRDAATAP VGDRVPYVIIKAAKGAKAYERSEDPIYVL+NN Sbjct: 866 VQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNN 954
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_SOYBN (DNA polymerase delta catalytic subunit OS=Glycine max GN=POLD1 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.420e-69 Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 3 Query: 12 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 VQYVK+ ISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN Sbjct: 823 VQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 911 HSP 2 Score: 112.079 bits (279), Expect = 3.420e-69 Identity = 60/91 (65.93%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 277 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNGTLCSHCKGKQPELYCKTVSQ 549 IPID HYYLENQISKP+LRIFEPILKNASKELL G HTRSISISTPSNSGI++FAK+QL + K ++ S K+ L C TV Q Sbjct: 912 IPIDPHYYLENQISKPILRIFEPILKNASKELLHGSHTRSISISTPSNSGILRFAKKQLPALVVKLYLARVITLSVHIAKEGRLSC-TVKQ 1001
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_ARATH (DNA polymerase delta catalytic subunit OS=Arabidopsis thaliana GN=POLD1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.290e-68 Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 21 VKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 VK TISDLLMNR+DLSLLVITKGLTKTGDDYEVK+AH ELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVL+NN Sbjct: 859 VKKTISDLLMNRIDLSLLVITKGLTKTGDDYEVKSAHGELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNN 944 HSP 2 Score: 121.324 bits (303), Expect = 1.290e-68 Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 1 Query: 277 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI 480 IPID +YYLENQISKPLLRIFEP+LKNASKELL G HTRSISI+TPSNSGIMKFAK+QLSC+GCK I Sbjct: 945 IPIDPNYYLENQISKPLLRIFEPVLKNASKELLHGSHTRSISITTPSNSGIMKFAKKQLSCVGCKVPI 1012
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD_CANAL (DNA polymerase delta catalytic subunit OS=Candida albicans GN=POL3 PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.547e-47 Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 3 Query: 15 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 ++VK TI+DLL NR+DLS LVITK +K DY K AHVELAERMRKRD +AP +GDRV YVIIK G K YE+SEDP+YVLEN+ Sbjct: 796 RFVKQTIADLLQNRIDLSQLVITKAYSK--HDYSAKQAHVELAERMRKRDPGSAPTLGDRVAYVIIKTG-GDKNYEKSEDPLYVLENS 880 HSP 2 Score: 102.449 bits (254), Expect = 1.547e-47 Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 256 LFMC*KIIPIDTHYYLENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN---GTLCSHC--KGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPGLSSSGMTPELSGSAPYFFPATKATAD 687 L++ +PID YYL+ Q++KPL RIF PIL + +KELL+G HTR+I ++ P G+++FAK+ C+ C+ + G LC +C GK P+LY +SQ+ L+ F LWT C + G + + P F+ TKA D Sbjct: 874 LYVLENSLPIDVKYYLDQQLTKPLERIFIPILGETKTKELLTGSHTRTIKVAAPKTGGLLRFAKKSEVCVSCRTPLKKDNLGALCPNCIKDGKGPDLYGNALSQMNYLENKFSRLWTECQRCQGSLHQEVLCS-NKDCPIFYMRTKAQKD 1022
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_DICDI (DNA polymerase delta catalytic subunit OS=Dictyostelium discoideum GN=pold1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.922e-41 Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 15 QYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 +Y KS ISDLL NR+DLS+LVITK L+KT Y+ K H ELA +MR RD ATAPN+GDRVPYV+I+ +KGA YE++EDP+Y LE+N Sbjct: 865 EYTKSVISDLLQNRLDLSMLVITKALSKT--QYKGKVIHNELARKMRARDPATAPNLGDRVPYVVIQGSKGAPIYEKAEDPLYALEHN 950 HSP 2 Score: 76.2554 bits (186), Expect = 1.922e-41 Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 277 IPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPS--NSGIMKFAKRQLSCIGCKALISN--GTLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPGLSSSGMTPELSGS--APYFFPATKATAD 687 I +D YYL+ Q+ PL+RIF+PI+ N + G+HTR+I+ ST S N G K++ C+ C +++ T C +C+ K+ LY ++ +V L+ F WT C + S S P L + P F+ TK D Sbjct: 951 ILLDCQYYLDKQLKAPLIRIFKPIMSNPDL-IFHGEHTRTIAQSTLSDNNKGFFGTLKKKKVCMNCPKELTDTESTTCINCQHKEASLYQTSLEKVTSLETKFSEAWTQCQR---CSGSLHQPVLCSNRDCPIFYMRTKVQLD 1089
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD_SCHPO (DNA polymerase delta catalytic subunit OS=Schizosaccharomyces pombe GN=pol3 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.054e-28 Identity = 65/126 (51.59%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 238 MRGQRILFMC*KIIPIDTHYYLENQISKPLLRIFEPILKNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISNG--TLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPG 609 MR + +++ IPID YYLENQ+SKPLLRIFEPIL + LL GDHTR+IS++ PS GIMKFA + +C+GCKA I G LC +C + ELY + V+QV +L+V F LWT C + G Sbjct: 920 MRSEDPIYVLENNIPIDAKYYLENQLSKPLLRIFEPILGEKASSLLHGDHTRTISMAAPSVGGIMKFAVKVETCLGCKAPIKKGKTALCENCLNRSAELYQRQVAQVNDLEVRFARLWTQCQRCQG 1045 HSP 2 Score: 21.1718 bits (43), Expect = 1.054e-28 Identity = 8/21 (38.10%), Postives = 13/21 (61.90%), Query Frame = 2 Query: 590 RAQKSQGSLHQE*LPNCPDLP 652 + Q+ QGS+HQ+ + D P Sbjct: 1039 QCQRCQGSMHQDVICTSRDCP 1059 HSP 3 Score: 116.701 bits (291), Expect = 1.970e-25 Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 3 Query: 18 YVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 + K ISDLL N++D+S LVITK L+KT DY K AHVELAERMRKRDA +AP +GDRV YVIIK A+G + Y RSEDPIYVLENN Sbjct: 848 FTKKVISDLLQNKIDMSQLVITKALSKT--DYAAKMAHVELAERMRKRDAGSAPAIGDRVAYVIIKGAQGDQFYMRSEDPIYVLENN 932
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_CAEEL (DNA polymerase delta catalytic subunit OS=Caenorhabditis elegans GN=F10C2.4 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.996e-27 Identity = 56/89 (62.92%), Postives = 72/89 (80.90%), Query Frame = 3 Query: 12 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 + + K TISDLL N++D+SLL+I+K LTK+GD Y+ K AHVELA RM+KRDA +AP +GDRVPYV + AAK AYER+EDP +VL+NN Sbjct: 831 LDFAKRTISDLLCNKIDISLLIISKELTKSGDKYQAKQAHVELAARMKKRDAGSAPRLGDRVPYVFVAAAKNVPAYERAEDPTFVLQNN 919 HSP 2 Score: 96.2857 bits (238), Expect = 2.755e-19 Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 226 VPRLMRGQRILFMC*KIIPIDTHYYLENQISKPLLRIFEPIL-KNASKELLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALI----SNGTLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPC 594 VP R + F+ IP+DT +YL NQ++KPL RIFEPIL A K L+ G+HTR ++ G+ F + +C+GCK+++ S +C HC+ K P ++ ++ + EL+ FG LWT C Sbjct: 903 VPAYERAEDPTFVLQNNIPLDTKHYLTNQLAKPLARIFEPILGDRAEKILVEGEHTRVRTVVQSKVGGLAAFTTKSATCLGCKSVLPRAESENAVCKHCEPKLPTIFASRMNTMHELENHFGRLWTEC 1030
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_RAT (DNA polymerase delta catalytic subunit OS=Rattus norvegicus GN=Pold1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.841e-26 Identity = 59/89 (66.29%), Postives = 70/89 (78.65%), Query Frame = 3 Query: 12 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 V + K ISDLL NR+D+S LVITK LT+ DY K AHVELAERMRKRD +APN+GDRVPYVII AAKG AY +SEDP++VLE++ Sbjct: 857 VAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAERMRKRDPGSAPNLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS 945 HSP 2 Score: 111.309 bits (277), Expect = 8.275e-24 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 226 VPRLMRGQRILFMC*KIIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-GTLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPG 609 V M+ + LF+ +PIDT YYLE Q++KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ SCIGC+++I + G +C C+ ++ ELY K VS + L+ F LWT C + G Sbjct: 929 VAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNSCIGCRSVIDHQGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQG 1059
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_MOUSE (DNA polymerase delta catalytic subunit OS=Mus musculus GN=Pold1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.360e-25 Identity = 58/89 (65.17%), Postives = 70/89 (78.65%), Query Frame = 3 Query: 12 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 V + K ISDLL NR+D+S LVITK LT+ DY K AHVELAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE++ Sbjct: 859 VAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS 947 HSP 2 Score: 105.916 bits (263), Expect = 3.477e-22 Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 226 VPRLMRGQRILFMC*KIIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-GTLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPG 609 V M+ + LF+ +PIDT YYLE Q++KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I + G +C C+ ++ EL K VS + L+ F LWT C + G Sbjct: 931 VAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDHQGAVCKFCQPRESELSQKEVSHLNALEERFSRLWTQCQRCQG 1061
BLAST of EY744976 vs. ExPASy Swiss-Prot
Match: DPOD1_MESAU (DNA polymerase delta catalytic subunit OS=Mesocricetus auratus GN=POLD1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.360e-25 Identity = 58/89 (65.17%), Postives = 70/89 (78.65%), Query Frame = 3 Query: 12 VQYVKSTISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENN 278 V + K ISDLL NR+D+S LVITK LT+ DY K AHVELAERMRKRD +AP++GDRVPYVII AAKG AY +SEDP++VLE++ Sbjct: 857 VAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHS 945 HSP 2 Score: 107.071 bits (266), Expect = 1.561e-22 Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 226 VPRLMRGQRILFMC*KIIPIDTHYYLENQISKPLLRIFEPILKNASKE--LLSGDHTRSISISTPSNSGIMKFAKRQLSCIGCKALISN-GTLCSHCKGKQPELYCKTVSQVPELKVLFG*LWTPCPKKPG 609 V M+ + LF+ +PIDT YYL Q++KPLLRIFEPIL E LL GDHTR ++ T G++ F KR+ CIGC+++I++ G +C C+ ++ ELY K VS + L+ F LWT C + G Sbjct: 929 VAAYMKSEDPLFVLEHSLPIDTQYYLGQQLAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVINHQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQG 1059 The following BLAST results are available for this feature:
BLAST of EY744976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744976 ID=EY744976; Name=EY744976; organism=Citrus sinensis; type=EST; length=947bpback to top |