EY744930

Overview
NameEY744930
Unique NameEY744930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FBL82_ARATH (F-box/LRR-repeat protein At5g22700 OS=Arabidopsis thaliana GN=At5g22700 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = 3
Query:   63 DLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITESSNCISDPTCIDKVLQLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELE 386
            D +S LPD++L  I+S LP K A  TS+LS+RW+ +W  T VLD D I    +  +  +   + L+  + S ++KF+L +   D+    I  W+  A+++R+Q  E++
Sbjct:    6 DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDID-IDAFDDATTFVSFASRFLEFSKDSCLHKFKLSVERDDVDMCTIMPWIQDAVNRRIQHLEVD 112          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FBL64_ARATH (F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana GN=At3g59200 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 3
Query:   54 IVEDLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDF------DGITESSNCISDP--TCIDKVLQLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELEL 389
            +  D +S LP+ ++ +I+S LP KEAA TSVLS +W+YL+ + T LDF      DG  +S   +S      +D+VL L    S+NKF L   + D+  + +T W+ + L + V   +L +
Sbjct:    4 VSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI 123          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FDL32_ARATH (Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis thaliana GN=At5g22670 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.825e-12
Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 3
Query:   45 KGEIVEDLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITESSNCISDPTCIDKVLQLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELELWPRL 401
            +G   +D +SLLPDD+L  I+S LP K A +TSVLS RWK       +L+F+ ++E          +   L   R + I+K +L    K    S +T W+++A+ ++VQ  ++  W  L
Sbjct:    5 RGVTSQDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFN-VSEFHGYYEFARVVHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWSYL 122          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FB228_ARATH (F-box protein At4g10400 OS=Arabidopsis thaliana GN=At4g10400 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.066e-12
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 3
Query:   63 DLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITESSNCISDPTC-IDKVLQLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELELW 392
            D +S LPD++L+ I+S +P K A  TS+LS RW++LW + T L F     S +      C +D+ L LHR   I  FRL L        +I  WV  A+S+ ++  EL+++
Sbjct:    2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR--ELKIY 110          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FB226_ARATH (F-box protein At4g09920 OS=Arabidopsis thaliana GN=At4g09920 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3
Query:   78 LPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITESSNCISDPTC-IDKVLQLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELELW 392
            LPD++L+ I+S +P K A  TS+LS RW++LW + T L F     S +      C +D+ L LHR   I  FRL L        +I  WV  A+S+ ++  EL+++
Sbjct:    7 LPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIR--ELKIY 110          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FBL42_ARATH (F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana GN=At3g03360 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 3
Query:   63 DLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGITESSNCISDPTCIDKVLQLHRGSSINKFRL-------CLYSKDLHESEITNWVYSALSKRVQIFELEL 389
            DL+S LPDDIL  I+S LP + A KTSVLS RW+++W+ T  L F           D  CI+++L  +R   +  FR+       C+   D H ++I +W+  A+S+ V+   L L
Sbjct:   37 DLISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSF------HRDRPDAPCINRILDRYRAPKMMSFRICSCCRAACISRPDTH-ADIDSWINFAMSRNVENLSLYL 145          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FBL56_ARATH (Putative F-box/LRR-repeat protein At3g58880 OS=Arabidopsis thaliana GN=At3g58880 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 46/120 (38.33%), Postives = 62/120 (51.67%), Query Frame = 3
Query:   63 DLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFDGI----------TESSNCISDPTCIDKVLQLHRGSSINKFRL-CLYSKDLHESEITNWVYSALSKRVQIFELEL 389
            DL+S LPDD+L +I+S L  KEAA TS+LS RW+YL  F   L+FD            T      S    +D+VL LH  S I KF L C    DL    +  W+ + L + V + +L +
Sbjct:    3 DLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQTREGTRQSFIDFVDRVLALHGDSPIRKFSLKCKTGVDL--DLLNQWICNVLQRGVLLIDLSM 120          
BLAST of EY744930 vs. ExPASy Swiss-Prot
Match: FBL75_ARATH (F-box/LRR-repeat protein At4g14103 OS=Arabidopsis thaliana GN=At4g14103 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 3
Query:   63 DLMSLLPDDILINIISRLPLKEAAKTSVLSSRWKYLWTFTTVLDFD--------GITESSNCISDPTCIDKVLQLHRGSSINKFRLCLYSKDLHESEITNWVYSALSKRVQIFELEL 389
            D++S LPDDI  +I+S LP KEAA TSVLS +W+YL+ F   LD D          TE S    D   +D+VL L   S ++KF L +    +    I  W+ + L + V   +L L
Sbjct:    8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMD--FVDRVLALQGNSPLHKFSLKI-GDGIDPVRIIPWINNVLERGVSDLDLHL 121          
The following BLAST results are available for this feature:
BLAST of EY744930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
FBL82_ARATH1.398e-1234.26F-box/LRR-repeat protein At5g22700 OS=Arabidopsis ... [more]
FBL64_ARATH1.398e-1235.83F-box/LRR-repeat protein At3g59200 OS=Arabidopsis ... [more]
FDL32_ARATH1.825e-1233.61Putative F-box/FBD/LRR-repeat protein At5g22670 OS... [more]
FB228_ARATH4.066e-1236.94F-box protein At4g10400 OS=Arabidopsis thaliana GN... [more]
FB226_ARATH1.545e-1136.79F-box protein At4g09920 OS=Arabidopsis thaliana GN... [more]
FBL42_ARATH2.018e-1137.07F-box/LRR-repeat protein At3g03360 OS=Arabidopsis ... [more]
FBL56_ARATH4.496e-1138.33Putative F-box/LRR-repeat protein At3g58880 OS=Ara... [more]
FBL75_ARATH5.872e-1138.46F-box/LRR-repeat protein At4g14103 OS=Arabidopsis ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-B01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744930 ID=EY744930; Name=EY744930; organism=Citrus sinensis; type=EST; length=921bp
CACGCGTCCGGAGACCGCGAATTACCCCTGCTACTCGTGAAGTGAAGGGC
GAAATTGTAGAGGATTTGATGAGTCTACTCCCAGATGATATTCTTATCAA
TATTATCTCTCGATTGCCACTTAAGGAAGCTGCAAAGACTTCTGTTCTTT
CCAGTAGATGGAAATATTTGTGGACTTTTACCACTGTTCTTGACTTTGAT
GGAATAACAGAATCTTCAAACTGTATAAGTGATCCAACTTGTATTGATAA
AGTCTTACAACTGCATAGAGGTTCAAGTATAAATAAGTTTAGATTATGTT
TGTATTCTAAGGACTTACATGAAAGTGAAATCACCAATTGGGTTTACTCG
GCATTATCAAAAAGGGTTCAAATCTTTGAGTTGGAGTTGTGGCCAAGGCT
TAAGAATTACACATTTCTGGAAAAACTGTTATAACAACCTTAAAAGTGAG
TTATCTGGCGTCAAGTATTTAAGATCCCTTCGCCCTTTTTAGCGTGAATG
TCACTGGAGAAATTCTTGAGTTTATTTTACATTAACTGTCCGCTTCTTGA
TCAATTTATCTTGTTGGCCCGCTCTGAAACTCTGGAAGCCCAAAAGGTCG
TAGGTCCTGCCACCCATTTGCAAAACCACACCCCCCGCGCATGGCAACAG
AATTACACCAAGCCAAAAAACTACCCCCCCAATCATATTGCTATTGCGAT
ACTTTCGCACCCAAGACAAAAAGTGAAGGAACACTGCTGAAAATCGACCC
CAACAGCACTCACAAACATCTCCACAAAGCAAAAACAAACCTAAAGAAAG
GATAATGCCGCAAGCTGAATATAAGCCAGCGATCGACAAGGGTGACGAAG
ACCGTAGAAAGACAACCCTCCGGCCGGGAGAACTCACAAACTGGCAAAAC
CAACCACCCCACCCTGATATA
back to top