EY744892

Overview
NameEY744892
Unique NameEY744892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.572e-28
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1
Query:  166 VPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ 471
            +PC+ ++D  G + K       SKE  +KMY+ M+TL VMDS+LY+ QRQGR SFY+T+ GEEAI+IGSAAAL   D I  QYRE GV +WRG+T+    NQ
Sbjct:   64 IPCYTIMDQEGVVSKPDQDPNFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSFGEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQ 165          

HSP 2 Score: 27.7202 bits (60), Expect = 1.572e-28
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  479 CKQGWMMGKGRQMPIHYG 532
            C     +GKGRQMP+H+G
Sbjct:  167 CTNEHDLGKGRQMPMHFG 184          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.624e-25
Identity = 86/252 (34.13%), Postives = 118/252 (46.83%), Query Frame = 1
Query:  100 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ--GGLQTRLDDGK-RQTDANSLWGLKKLKLPFPIIRHLFAIQPSLQAWL----GGAYFFLKMEKKRDSWCTCFYTGQRA----DPREGKNF----PCPDLTF---TNHCVETSPIRLYISDPNKGEGP 801
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + KE  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y L+ F  Q  G +    D GK RQ   +  +G K+        RH   I   L   +    G AY   +    R   C   Y G+ A    D   G NF     CP + F     + + T     Y  D     GP
Sbjct:   54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNIS---DLGKGRQMPVH--YGCKE--------RHFVTISSPLATQIPQAVGAAYAAKRANANRVVIC---YFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGP 289          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.624e-25
Identity = 86/252 (34.13%), Postives = 118/252 (46.83%), Query Frame = 1
Query:  100 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ--GGLQTRLDDGK-RQTDANSLWGLKKLKLPFPIIRHLFAIQPSLQAWL----GGAYFFLKMEKKRDSWCTCFYTGQRA----DPREGKNF----PCPDLTF---TNHCVETSPIRLYISDPNKGEGP 801
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + KE  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y L+ F  Q  G +    D GK RQ   +  +G K+        RH   I   L   +    G AY   +    R   C   Y G+ A    D   G NF     CP + F     + + T     Y  D     GP
Sbjct:   54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNIS---DLGKGRQMPVH--YGCKE--------RHFVTISSPLATQIPQAVGAAYAAKRANANRVVIC---YFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGP 289          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.624e-25
Identity = 86/252 (34.13%), Postives = 118/252 (46.83%), Query Frame = 1
Query:  100 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ--GGLQTRLDDGK-RQTDANSLWGLKKLKLPFPIIRHLFAIQPSLQAWL----GGAYFFLKMEKKRDSWCTCFYTGQRA----DPREGKNF----PCPDLTF---TNHCVETSPIRLYISDPNKGEGP 801
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + KE  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y L+ F  Q  G +    D GK RQ   +  +G K+        RH   I   L   +    G AY   +    R   C   Y G+ A    D   G NF     CP + F     + + T     Y  D     GP
Sbjct:   54 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNIS---DLGKGRQMPVH--YGCKE--------RHFVTISSPLATQIPQAVGAAYAAKRANANRVVIC---YFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGP 289          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.846e-25
Identity = 84/252 (33.33%), Postives = 118/252 (46.83%), Query Frame = 1
Query:  100 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ--GGLQTRLDDGK-RQTDANSLWGLKKLKLPFPIIRHLFAIQPSLQAWL----GGAYFFLKMEKKRDSWCTCFYTGQRA----DPREGKNF----PCPDLTF---TNHCVETSPIRLYISDPNKGEGP 801
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + +E  +K Y  M  L  MD +LYE+QR+GR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y L+ F +Q  G +    D GK RQ   +  +G K+        RH   I   L   +    G AY   +    R   C   Y G+ A    D   G NF     CP + F     + + T     Y  D     GP
Sbjct:   51 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKFYRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMSQCYGNVN---DPGKGRQMPVH--YGCKE--------RHFVTISSPLATQIPQAVGAAYAAKRANANRIVIC---YFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGP 286          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.972e-25
Identity = 84/252 (33.33%), Postives = 118/252 (46.83%), Query Frame = 1
Query:  100 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ--GGLQTRLDDGK-RQTDANSLWGLKKLKLPFPIIRHLFAIQPSLQAWL----GGAYFFLKMEKKRDSWCTCFYTGQRA----DPREGKNF----PCPDLTF---TNHCVETSPIRLYISDPNKGEGP 801
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + +E  +K+Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y L+ F  Q  G +    D GK RQ   +  +G K+        RH   I   L   +    G AY   +    +   C   Y G+ A    D   G NF     CP + F     + + T     Y  D     GP
Sbjct:   50 FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVS---DPGKGRQMPVH--YGCKE--------RHFVTISSPLATQIPQAVGAAYAAKRANANQIVIC---YFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGP 285          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.790e-24
Identity = 83/250 (33.20%), Postives = 116/250 (46.40%), Query Frame = 1
Query:  100 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ-GGLQTRLDDGKRQTDANSLWGLKKLKLPFPIIRHLFAIQPSLQAWL----GGAYFFLKMEKKRDSWCTCFYTGQRA----DPREGKNF----PCPDLTF---TNHCVETSPIRLYISDPNKGEGP 801
            FPG    +  ++ FI  +    +P +RV+D  G++I  S+   + +E  +K Y  M  L  MD +LYE+QRQGR SFY+T  GEE  ++GSAAAL   D +  QYRE GVL++R Y L+ F  Q  G  + L  G RQ   +  +G ++        RH   I   L   +    G AY   +    R   C   Y G+ A    D   G NF     CP + F     + + T     Y  D     GP
Sbjct:   64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDLGKG-RQMPVH--YGCRE--------RHFVTISSPLATQIPQAVGAAYAAKRANANRVVIC---YFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGP 299          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.548e-12
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 1
Query:  148 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQ 459
            E   ++ P F++L++ GE++      ++S E   ++   MV  +++D       RQGR  FY  T G+EA  I S  AL  +DFILP YR+   ++W G  L Q
Sbjct:   15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQ 118          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 33/104 (31.73%), Postives = 57/104 (54.81%), Query Frame = 1
Query:  148 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQ 459
            ++ +K+   F++L++ GE++  +    ++ +   ++   MV  +V+D       RQGR  FY  T G+EA  I +  AL  +DF+LP YR+   L+W G  L Q
Sbjct:   17 DAIKKQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHGLPLYQ 120          
BLAST of EY744892 vs. ExPASy Swiss-Prot
Match: ODPA_BACCE (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 1
Query:  178 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQ 459
            ++L++ GE++  +   ++S +   ++   MV  +V+D       RQGR  FY  T G+EA  + S  AL A+DFILP YR+   L+W G  L Q
Sbjct:   27 QILNEKGEVVNEAAMPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHFALEAEDFILPGYRDVPQLVWHGLPLYQ 120          
The following BLAST results are available for this feature:
BLAST of EY744892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ODBA_DICDI1.572e-2853.922-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_PANTR2.624e-2534.132-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_MACFA2.624e-2534.132-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_HUMAN2.624e-2534.132-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_MOUSE5.846e-2533.332-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_RAT9.972e-2533.332-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODBA_BOVIN3.790e-2433.202-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
ODPA_BACST2.548e-1234.62Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_BACSU6.275e-1131.73Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_BACCE6.275e-1136.17Pyruvate dehydrogenase E1 component subunit alpha ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-005-F10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744892 ID=EY744892; Name=EY744892; organism=Citrus sinensis; type=EST; length=959bp
CCACGCGTCCGGGGGCGTTCCGAGTCCACCGTTGCTTCCAATCAGCTGGA
TTCTTTGTCTTCCAGTGACAGCGATGATGATCATCATCAGGTCTTGGATT
TTCCCGGAGGCAAAGTTGGATATACTTCTGAAATGAGGTTCATTCCTGAG
TCTTCAGAGAAAAGAGTGCCTTGTTTTCGAGTTCTTGATGACAATGGAGA
GCTAATCAAGGGCAGTGATTTTCAACAGGTGAGCAAGGAAGTTGCTGTAA
AGATGTATAGCCATATGGTCACACTGCAGGTAATGGACTCTGTATTGTAC
GAAGCACAAAGGCAAGGGAGATTTTCTTTCTATCTTACAACAATTGGTGA
AGAAGCAATCAACATAGGATCAGCAGCTGCACTCAGCGCCGATGATTTTA
TCTTGCCTCAGTACCGAGAGCCTGGAGTACTCTTATGGCGTGGCTACACA
TTGCAACAATTTGCAAACCAGGGTGGTTTGCAAACAAGGCTGGATGATGG
GAAAAGGCAGACAGATGCCAATTCATTATGGGGTCTAAAAAAGCTTAAAT
TACCATTCCCCATAATCCGTCACCTATTCGCTATCCAACCTTCCCTCCAA
GCTTGGTTGGGGGGGGCTTATTTCTTCTTAAAAATGGAAAAAAAAAGGGA
TTCCTGGTGCACTTGCTTTTATACTGGGCAAAGGGCGGACCCCAGGGAGG
GGAAGAATTTTCCCTGCCCGGATTTAACTTTTACGAACCACTGTGTGGAA
ACATCCCCGATACGCCTCTACATCTCAGACCCAAACAAGGGCGAGGGCCC
GATTGTTTCGGAAATTCATAACGTAATCCATTTGCACAAACAAAGTCCAA
TCTGGGTGCTAACATGGATTCCGCCACAAATTGTCAAACCTCGATGATCA
AATAAGCATAACAAGGTAAAACGACTCGGCCATCACTATCCATACATACA
CAAAAGCGT
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