EY744888

Overview
NameEY744888
Unique NameEY744888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length990
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 3.320e-71
Identity = 136/185 (73.51%), Postives = 150/185 (81.08%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            M RKFFVGGNWKCNGT EEVKKIV+ LNE Q                FL LVKS+LR  F VAAQNCWVKKGGAFTGE+SAEMLVNL+IPWVILGHSERR ILNE +EFVGDKVAYAL+QGLKVIACVGETLE+REAGSTM+VVAAQTKAIADRV++WSN+V+AYEPVW      +VA PAQ  +
Sbjct:    1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAI-GTGKVASPAQAQE 184          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 268.085 bits (684), Expect = 5.664e-71
Identity = 133/185 (71.89%), Postives = 148/185 (80.00%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            MGRKFFVGGNWKCNGTT++V+KIV  LNEGQ                FL +VKS LR  FHVAAQNCWVKKGGAFTGE+SAEMLVNL +PWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLEQREAGSTM+VVAAQTKAIA+++  WSN+V+AYEPVW      +VA PAQ  +
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAI-GTGKVATPAQAQE 184          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.648e-70
Identity = 133/185 (71.89%), Postives = 146/185 (78.92%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            MGRKFFVGGNWKCNGT EEVKKI++ LN                   FL LVK+ LRP FHVAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLE+RE+GSTM+VVAAQTKAIADRV  W+N+V+AYEPVW      +VA PAQ  +
Sbjct:    1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAI-GTGKVASPAQAQE 184          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 2.152e-70
Identity = 135/188 (71.81%), Postives = 149/188 (79.26%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSKSTF 595
            MGRKFFVGGNWKCNGT+EEVKKIV++LNE +                FL  VK+ LR  FHVAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +LNE NEFVGDK AYALSQGLKVIACVGETLEQREAGST+ VVAAQTKAIA++VS W+NIV+AYEPVW      +VA PAQ  +  F
Sbjct:    1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAI-GTGKVASPAQAQEVHF 187          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 262.307 bits (669), Expect = 3.108e-69
Identity = 130/185 (70.27%), Postives = 146/185 (78.92%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            MGRKFFVGGNWKCNGTT++V KIV +LNEGQ                FL +VKS LRP   VAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLEQRE+GSTM+VVAAQTKAI++R+  W+N+V+AYEPVW      +VA P Q  +
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAI-GTGKVATPDQAQE 184          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 250.366 bits (638), Expect = 1.222e-65
Identity = 126/185 (68.11%), Postives = 141/185 (76.22%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            MGRKFFVGGNWKCNGT  +V+ IV+ LN GQ                FL  VK  LRP   VAAQNCWVKKGGAFTGE+SAEMLVNL IPWVILGHSERR +L E +EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTMEVVA QTKAIAD++  W+N+V+AYEPVW      +VA PAQ  +
Sbjct:    1 MGRKFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAI-GTGKVASPAQAQE 184          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 248.44 bits (633), Expect = 4.644e-65
Identity = 125/185 (67.57%), Postives = 140/185 (75.68%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            MGRKFFVGGNWKCNGT E+V+ IV  LN GQ                FL +VK+ LRP   VAAQNCWVKKGGAFTGE+SAEML NL +PWVILGHSERR +L E +EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTMEVVA QTKAIA ++  WSN V+AYEPVW      +VA PAQ  +
Sbjct:    1 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIAGKIKDWSNGVVAYEPVWAI-GTGKVATPAQAQE 184          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.508e-52
Identity = 101/124 (81.45%), Postives = 110/124 (88.71%), Query Frame = 2
Query:  215 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            VAAQNCWVKKGGAFTGE+SAEML NL +PWVILGHSERR +LNE NEFVGDKVAYALSQGLKVIACVGETLEQREAG+TMEVVAAQTKAIAD++SSW N+VLAYEPVW      +VA PAQ  +
Sbjct:    3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAI-GTGKVASPAQAQE 125          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.220e-50
Identity = 105/186 (56.45%), Postives = 119/186 (63.98%), Query Frame = 2
Query:   32 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            MGRKFFVGGNWKCNGT E V KIV  LNE                  FL    + L+    VAAQNCWVKKGGAFTGE+SA+ML NL I WVILGHSERR +L E NEFVG K AYA S+GL VIAC+GE LE+REAG T +V   Q K+ A      W N+V+AYEPVW      +VA P Q  +
Sbjct:    1 MGRKFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAI-GTGKVASPEQAQE 185          
BLAST of EY744888 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.149e-47
Identity = 97/182 (53.30%), Postives = 120/182 (65.93%), Query Frame = 2
Query:   41 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWGYWNWERVALPAQGSK 586
            KFFVGGNWKCNGT E + K+VS LN                   ++  VKSSL     V+AQN W+ KGGAFTGEISAE LV++   WVILGHSERR ++ E +EF+G K AYALSQ LKV+AC+GE LE+REAG T +V   Q KA AD ++ W+N+V+AYEPVW      +VA P Q  +
Sbjct:   48 KFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFI--YIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAI-GTGKVASPEQAQE 226          
The following BLAST results are available for this feature:
BLAST of EY744888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_ARATH3.320e-7173.51Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_MAIZE5.664e-7171.89Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_PETHY1.648e-7071.89Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_COPJA2.152e-7071.81Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_ORYSJ3.108e-6970.27Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_SECCE1.222e-6568.11Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_HORVU4.644e-6567.57Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_LACSA4.508e-5281.45Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_STELP4.220e-5056.45Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIC_SECCE1.149e-4753.30Triosephosphate isomerase, chloroplastic OS=Secale... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-005-F06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744888 ID=EY744888; Name=EY744888; organism=Citrus sinensis; type=EST; length=990bp
CCACGCGTCCGCACACACGCACTCGTCGAAAATGGGCAGGAAGTTCTTCG
TCGGCGGTAACTGGAAATGCAATGGAACAACTGAAGAAGTGAAAAAGATA
GTGAGCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTCGTTGAGGT
CGTTGTTAGCCCTCCGTTTGTGTTTCTTGGACTGGTGAAGAGTTCGTTGA
GGCCTGGCTTTCATGTTGCGGCACAGAATTGCTGGGTCAAGAAGGGAGGT
GCTTTCACCGGTGAGATTAGTGCGGAAATGCTCGTCAATTTGGAAATTCC
TTGGGTCATTCTTGGTCATTCTGAAAGGAGACTCATTTTGAATGAATTAA
ATGAGTTTGTTGGGGATAAGGTTGCATATGCACTTTCTCAAGGTTTGAAG
GTGATTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAAGCAGGATCTAC
TATGGAAGTTGTTGCTGCACAAACTAAAGCAATCGCAGATCGAGTCTCAA
GCTGGTCAAACATTGTTTTGGCCTATGAACCTGTGTGGGGCTATTGGAAC
TGGGAAAGGGTTGCCCTCCCAGCGCAGGGCTCAAAAAGTACTTTTTGAAA
TTGAGGAATGGGCTCTTTGCAACCACCAATCCTGAAATTGCTGCAGCAAC
CCGGGATTATCTAACGAGGAACCCGTAAATGGTGGAAACCTGGAAGGAAA
TTGGGTTGCACACCCTGATGTCTGCGGAGTTTTTGGTTGGGAGGGGGTTT
CCTTGAAAGCCGGGATTCTCTTTAGACATCCGCCAAATTCCCTCGGAACT
ACAGTAAAGACTTCTCTACGGTTATATTTTAGAGGCACGGCTTATAGTAA
GTAAAGGAATTTACATACTGTTAGCAAATTAAAACAAAACCACTGTTGTG
GCGAAACAATAAACCCACAAATAATAATTGTTTTCTCATCAAACTAACGC
TCAGACACGACACGCAACAACCAATTCATCTCCCCAGAAC
back to top