EY744885

Overview
NameEY744885
Unique NameEY744885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1020
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744885 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.751e-25
Identity = 73/153 (47.71%), Postives = 92/153 (60.13%), Query Frame = 1
Query:  211 EKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVS----DNSGQDVSARNMAAPRNWESMNLFPQQAGFA------PKNDTPNMIDSSLN-KPAPQTAQMTIFYGGQVIVFNDFPADKANEIMQLAKQRGAH 636
            +K SFSQTCS LSQYLKE GSFGDLSLG++   + NG     R+P  TTM+LFP      D+  QDV           +  NLFP+Q  F+      PK D   M  ++ + KP  QTA +TIFY GQVIVFNDF A+KA E++ LA +  A+
Sbjct:   19 KKPSFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQP-TTTMSLFPCEASNMDSMVQDV-----------KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTAN 159          
BLAST of EY744885 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.286e-21
Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  214 KSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSARNMAAPRNWESMNLFPQQAGFAPKNDTPNMIDSSL-------NKPAPQTAQMTIFYGGQVIVFNDFPADKANEIMQLAKQRGA 633
            K SFSQTC+ LS+YLKE GSFGDLSLG++   + NG    P     T MNLFP  + SG D S    A   + +   +FP+Q+ F+  + +    D  +        KP  Q+A +TIFYGG+V+VF+DF A+KA E++ LA +  A
Sbjct:   15 KPSFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQP-----TMMNLFP-CEASGMDSS----AGQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSA 151          
BLAST of EY744885 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.596e-15
Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  208 PEKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQD--VSARNMAAPRNWESMNLFPQQAGFAPKNDTPNMID-SSLNKPAPQT--AQMTIFYGGQVIVFNDFPADKANEIMQLAKQ 624
            PEKS+FSQ CSLLS+YLKE GSFG++++G++   +               + L    D  GQ   +     +  R ++ +  F          D    ID S   K AP++  +Q+TIF+GG+V+VFN+FP DKA EIM++AK+
Sbjct:    7 PEKSNFSQRCSLLSRYLKEKGSFGNINMGLARKSD---------------LELAGKFDLKGQQNVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKE 135          
The following BLAST results are available for this feature:
BLAST of EY744885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TI10A_ARATH3.751e-2547.71Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10... [more]
TI10B_ARATH3.286e-2142.86Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10... [more]
TI11B_ARATH4.596e-1537.50Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-005-F03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744885 ID=EY744885; Name=EY744885; organism=Citrus sinensis; type=EST; length=1020bp
CCACGCGTCCGATCAACAGATAAGCCTTTTTCTCCTTACAATACAGATTG
ATCATCCAACAGAACAACTTCACCAATTCAATTCTGCAGCGTCAGTTGCA
GCGCACTAGTTTTATTTTTAAAATTTATTTTTGCTTGTGGGTTTCCGCTT
CTGAGTTGGTTAAACACAACAAGTATGGCGAGCTCGTCGGAGATGTCGGT
TAACTTGCCGGAGAAATCAAGTTTCTCTCAGACGTGTAGTCTTTTGAGTC
AGTACTTGAAAGAGGGAGGTAGCTTTGGAGATCTTAGCCTCGGGATATCA
AGCAACATTGAAGCTAATGGGGTACCCGAGATCCCGCGGCGGCCAGCAGC
TACAACTATGAATTTGTTTCCAGTAAGTGACAACTCTGGACAAGATGTTT
CAGCTCGAAACATGGCAGCTCCTCGAAACTGGGAATCAATGAATTTGTTC
CCTCAACAAGCTGGTTTTGCTCCTAAGAATGATACCCCTAACATGATAGA
TTCAAGTTTAAACAAGCCCGCTCCGCAAACTGCTCAAATGACTATATTTT
ATGGCGGACAAGTGATTGTGTTCAATGATTTTCCTGCTGATAAAGCAAAT
GAAATCATGCAATTAGCCAAGCAACGGGGAGCTCACTGAACCATGGGTAC
CGCTTAACCCTCTATGGAACTTGCCGCCCCAGGGTTACACTTCTTTTGCT
GCTAGTTAACCCAAAAAGTCCCATTTGAATCCACTCCCCCCCCGGTTTTT
CCTGGGCCCCCCAAAATTCCAAACGAAAGCTAATTGGCTCCGGTTCCCCC
CCCAACAAAAAAAAAATTTCCCTAATTTTGGGAAACAATTTAAATTCCCC
AAAACCCCCCCTCACCCTCCCCTCAAAAAACCTTTGGGGATTTCACCCAA
TTTTGCGAAAGGGAAAAAATTCCCCCCCCCCCAGGGGGTTCTTTTGGGGA
AAAAAAAAAAAAAAAAAAAAAGGGGAATTTTGTTTTGGCAAAAAAAAAAA
CCACCCCCCACCACCCCACA
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