EY744881

Overview
NameEY744881
Unique NameEY744881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744881 vs. ExPASy Swiss-Prot
Match: GOGC4_ARATH (Golgin candidate 4 OS=Arabidopsis thaliana GN=GC4 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.617e-36
Identity = 96/189 (50.79%), Postives = 118/189 (62.43%), Query Frame = 2
Query:   80 MRGTLANYKENLNKIALDVHYDD--DGEELKIYXXXXXXXXXXXXXXXXXXFANSKSVSWSPVSNGFESPHDPEIERYKAEIKRLQESEAEIKALSVNYAALLKEKEEQISRFNGEYGLLKQNLDATNAALNAFRNGNSKASSNGINIPKGSGDLSPSKQHKLTAQGKKPPRRGHQLAKWVLLKQDGRE 640
            M  ++AN KENLNKIA DVH DD  D E+L IY                   +N    S SP++NGFESP +PEIERYKAEI +LQ+SE+EIKALSVNYAALLKEKE+QISR N E G LKQNL +TNAAL   R   S+AS+N  N  KG+GD SP++  +     K      +Q+   +  K +G E
Sbjct:    1 MWSSVANLKENLNKIAHDVHDDDEDDDEDLTIYGSTNGGTDRRN--------SNGFRYSRSPMANGFESPVNPEIERYKAEINKLQKSESEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAALKESRLDLSRASNN--NAIKGNGDHSPNRSQRSPTNWK----NRNQMNNGIASKPNGTE 175          
BLAST of EY744881 vs. ExPASy Swiss-Prot
Match: GOGC3_ARATH (Golgin candidate 3 OS=Arabidopsis thaliana GN=GC3 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.312e-31
Identity = 84/168 (50.00%), Postives = 105/168 (62.50%), Query Frame = 2
Query:   80 MRGTLANYKENLNKIALDVHYDDDGEELKIYXXXXXXXXXXXXXXXXXXFANSKSVSWSPVSNGFESPHDPEIERYKAEIKRLQESEAEIKALSVNYAALLKEKEEQISRFNGEYGLLKQNLDATNAALNAFRNGNSKASSNGINIPKGSGDLSPSKQHKLTAQGKKP 583
            M  ++ N K NL+KI LDVH DD+ EE  ++                  F   +SVS   +SNG ESP   EIERYKAEIK+LQESE++IKALSVNYAALL+EKE+QISR N E G LKQNL +T+AAL   R   S+ S+N     KG+ D SP++ HK  +  K P
Sbjct:    1 MWSSIENMKANLHKIVLDVHEDDE-EEDDLHKYGSANGVSNSDRRNSSGF---RSVSRYSISNGIESPAHHEIERYKAEIKKLQESESDIKALSVNYAALLREKEDQISRLNQENGSLKQNLTSTSAALKEARTDISRGSNN--YAIKGNNDQSPNRLHKSVSHLKSP 162          
The following BLAST results are available for this feature:
BLAST of EY744881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GOGC4_ARATH7.617e-3650.79Golgin candidate 4 OS=Arabidopsis thaliana GN=GC4 ... [more]
GOGC3_ARATH3.312e-3150.00Golgin candidate 3 OS=Arabidopsis thaliana GN=GC3 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-005-E11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744881 ID=EY744881; Name=EY744881; organism=Citrus sinensis; type=EST; length=980bp
CGGACGCGTGGGCTCGAAGGTATATTTAAATCTAAAATTCTTTGAATCTC
TCTCTTTCAATTTGGATTCGGATTGAAGAATGAGGGGCACCCTTGCAAAT
TATAAGGAAAACCTAAACAAGATCGCACTTGATGTGCACTACGACGACGA
TGGGGAAGAGCTCAAGATCTACGATTCACGCAATGTAGACGACATGTCGG
TCTCTGATCGTAGGGATTCTCACAGTTTTGCCAATTCAAAGTCCGTTTCA
TGGTCTCCGGTATCAAATGGTTTCGAATCACCGCATGATCCTGAGATTGA
ACGGTATAAAGCGGAAATTAAGAGGCTTCAAGAATCCGAGGCGGAAATTA
AAGCATTATCAGTTAATTATGCGGCCTTGTTAAAGGAGAAAGAGGAACAG
ATTTCCAGATTTAATGGAGAATATGGCTTGTTGAAGCAAAATCTGGATGC
AACGAATGCTGCTCTGAATGCATTTAGAAATGGAAATTCGAAAGCATCAA
GTAACGGCATTAACATTCCCAAGGGTAGTGGTGATCTATCACCAAGTAAA
CAGCATAAACTTACCGCTCAAGGTAAAAAACCGCCACGCCGGGGCCATCA
ATTGGCAAAATGGGTTCTCCTAAAACAAGATGGAAGGGAACCAATGGGGG
CCCATGCTTTTCCAAACTGAAAGTTGGACCAAAGTAATAAGAATGCCAGG
GGAAAAAAAAAAGGAGCTTGGGAAAATTTGCTGGGAAAAAAAAAAATAAA
GGCCCCCGGGGTGGCGAAACAGCACCAGTTTATGGATTCCAACAACCAAT
AACAAGTTTAGGGAGGGGAACCCTGGCAACAAGCAACCCCACATAAAACT
GCCCACTAGTTGCCCACGTTAAAAAAATTAACAACAGAAAAAAAACCAGG
GCTTAAAGAGGAAATATATGCGCGCAGCGCGAGAGCTCATGGAAGATCCG
TCTGTAAAAAAAGCGGCGCCGCACACCGGA
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