EY680422

Overview
NameEY680422
Unique NameEY680422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CYAA5 (Elongation factor P OS=Cyanothece sp. (strain ATCC 51142) GN=efp PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.748e-19
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G++IE+DG+ WRV+EFLHVKPGKG+AFVRTKL+N  +G+ VERTFRAG TV +A + K T
Sbjct:    3 SSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVERTFRAGETVPQATLEKRT 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_ACAM1 (Elongation factor P OS=Acaryochloris marina (strain MBIC 11017) GN=efp PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.151e-18
Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFK 558
            SSND + G +IE+DG+ WRV+EFLHVKPGKG+AFVRTKL+N  SG+ VERTFRAG TV +A++ K
Sbjct:    3 SSNDFRTGVSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQSGSVVERTFRAGETVPQANLEK 67          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_THEEB (Elongation factor P OS=Thermosynechococcus elongatus (strain BP-1) GN=efp PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G +IE+DGA WRV+EFLHVKPGKG+AFVRTKL+N  +G  +ERTFRAG TV +A + K T
Sbjct:    3 SSNDFRPGVSIELDGAVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVIERTFRAGETVPQATLEKRT 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_SYNP6 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=efp PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G+ IE+DGA WRV+EFLHVKPGKG+AFVRTKL+N  +G  VE+TFRAG TV +A + K T
Sbjct:    3 SSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKST 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_SYNE7 (Elongation factor P OS=Synechococcus elongatus (strain PCC 7942) GN=efp PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.503e-18
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G+ IE+DGA WRV+EFLHVKPGKG+AFVRTKL+N  +G  VE+TFRAG TV +A + K T
Sbjct:    3 SSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKST 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_MICAN (Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) GN=efp PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.963e-18
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G+ IE+DG+ WRV+EFLHVKPGKG+AFVRTKL+N  +G  VERTFRAG T+  A + K T
Sbjct:    3 SSNDFRSGTTIEIDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVVERTFRAGETLPSATIEKRT 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CYAP8 (Elongation factor P OS=Cyanothece sp. (strain PCC 8801) GN=efp PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.963e-18
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G+ IE+DG+ WRV+EFLHVKPGKG+AFVRTKL+N  +G+ VE+TFRAG TV +A + K T
Sbjct:    3 SSNDFRTGTTIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVEKTFRAGETVPQATLEKRT 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_SYNP2 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=efp PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18
Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKET 564
            SSND + G++IE+DG+ WRV+EFLHVKPGKG+AFVRTKL+N  +G+ VE+TFRAG TV +A + K T
Sbjct:    3 SSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVEKTFRAGETVPQAILDKRT 69          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_SYNJB (Elongation factor P OS=Synechococcus sp. GN=efp PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFK 558
            SSND++ G ++E+DGAP++V+EFLHVKPGKGAAFVRTKL+N  +G  VE+TFRAG T+  A + K
Sbjct:    3 SSNDLRPGVSVEIDGAPYKVIEFLHVKPGKGAAFVRTKLKNMQTGNVVEKTFRAGETLPAATIEK 67          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_TRIEI (Elongation factor P OS=Trichodesmium erythraeum (strain IMS101) GN=efp PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFK 558
            SSND + G  IE+DG+ WRV+EFLHVKPGKG+AFVRTKL+N  +G  VERTFRAG TV +A + K
Sbjct:    3 SSNDFRPGVTIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQNGNVVERTFRAGETVPQATLDK 67          
The following BLAST results are available for this feature:
BLAST of EY680422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
EFP_CYAA56.748e-1965.67Elongation factor P OS=Cyanothece sp. (strain ATCC... [more]
EFP_ACAM11.151e-1867.69Elongation factor P OS=Acaryochloris marina (strai... [more]
EFP_THEEB1.503e-1865.67Elongation factor P OS=Thermosynechococcus elongat... [more]
EFP_SYNP61.503e-1865.67Elongation factor P OS=Synechococcus sp. (strain A... [more]
EFP_SYNE71.503e-1865.67Elongation factor P OS=Synechococcus elongatus (st... [more]
EFP_MICAN1.963e-1864.18Elongation factor P OS=Microcystis aeruginosa (str... [more]
EFP_CYAP81.963e-1864.18Elongation factor P OS=Cyanothece sp. (strain PCC ... [more]
EFP_SYNP22.564e-1864.18Elongation factor P OS=Synechococcus sp. (strain A... [more]
EFP_SYNJB9.744e-1863.08Elongation factor P OS=Synechococcus sp. GN=efp PE... [more]
EFP_TRIEI1.273e-1766.15Elongation factor P OS=Trichodesmium erythraeum (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680422 ID=EY680422; Name=EY680422; organism=Citrus sinensis; type=EST; length=846bp
TGATACGCTGCGTTCATTCTACTACTGTTTTATTCTCATTTTTTTCAAAA
AAAAAATAATAATAGGGGAAGAAGGTATTGGCTGCTCTCAAGTCTCGATA
TGCTTTAGGCGGTAGTACCCAGACTCTCATTCCGGGACACACTCCTTATC
TAAGAGAGCGTGTCGCGGCCTTCTGTATTTTGTTTGATAAAACCAAATAT
CATTTCTCACAGATAACCAACCACCATGGCGGGAACCGCCGCCACCGTTA
ATCTCTCATCAGCGCCCTATCTCCTCCGCCGTTCGTCATTTACTACACTC
TCGTCAAAGCCGTCCGTACTCCCAATGCGACCACGTTCCAAATTTCCCAG
GATCTACGCGTTTAGTAGCAACGATATCAAAGTGGGTTCCAACATTGAAG
TTGACGGAGCTCCGTGGCGTGTTTTGGAGTTTCTTCATGTGAAACCTGGG
AAAGGAGCAGCATTTGTGAGGACCAAGCTTCGCAATTATATGTCTGGAAC
CACTGTTGAGAGAACTTTTCGTGCAGGGATTACGGTTGAAGAGGCAGATG
TATTCAAGGAAACCCAAGCAATTCACGTAACAAGATGGCTCCATGTTTGT
GTTTATGGGATCTGACCACATTTGAAGAAGTTCCTCCTAATGAGACAGAT
GTCGGGAAAAAAAAAAAAGTGGGTGAAAAAAGGGAATGGGATGGCAATTT
TCCTATTCTGGAAAGGGAAAAATTTATTGATTTTGAAAGTTCCCATTTAC
GTTTCAGCTGAACGGGGGTTGAAGGTTGATCCCGGGCCTTAAAGGGGGGA
CCCGGGCTTCGGGGGGGGTCAAAAACCTCCAACCCCTTAAAACCGT
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