EY680380

Overview
NameEY680380
Unique NameEY680380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.869e-14
Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 3
Query:  384 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYK 665
            + + F  ++     A GF+ Y SF+ A  ++    F  TG    + +E+ AFLA +  +T+ G+  A  GP AWGLCY  E++P  SYCD + K
Sbjct:   58 YASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDK 149          

HSP 2 Score: 27.7202 bits (60), Expect = 2.869e-14
Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 2
Query:  671 YPCTPGTKYYGPRAIPIYWN 730
            +PC PG  Y+G   I I WN
Sbjct:  151 WPCYPGKSYHGRGPIQISWN 170          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14
Identity = 47/135 (34.81%), Postives = 62/135 (45.93%), Query Frame = 3
Query:  348 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            ++ IS       FE     RN     A GF+ Y++FITAT  +    FGTTG    + KEI AFLA    +T+ G+  A  GP +WG CYN E      YC  S ++  P         +G    +   NYG  G
Sbjct:    2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAG 132          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 41/124 (33.06%), Postives = 59/124 (47.58%), Query Frame = 3
Query:  381 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            QF++    RN     A GF+ Y +FITA   +   GFGTTG    + KE+ AF      +T+ G+  A  GP +WG C+  E +P+  YC+ S  +  P         +G    +   NYG  G
Sbjct:   94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATW--PCASGKRYYGRGPMQLSWNYNYGLCG 213          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 3
Query:  381 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            QF++    RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G+  A  GP +WG C+  E +PS +YC  S ++  P     +   +G    +   NYG  G
Sbjct:   79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCG 198          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = 3
Query:  384 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPGE 755
            F+     RN P   A GF+ Y +F+ A   +    FGTTG+   + +E+ AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S +Y  P     +   +G    +   NYG  GE
Sbjct:   11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGE 130          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.597e-13
Identity = 35/104 (33.65%), Postives = 49/104 (47.12%), Query Frame = 3
Query:  357 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKY 668
            IS+      F+     RN        F+ Y +FITA   ++  GFGTTG    + +E+ AF A    +T+ G+  A  G  AWG CY  E     SYC  S ++
Sbjct:   85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFR--GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQW 186          

HSP 2 Score: 28.8758 bits (63), Expect = 6.597e-13
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 2
Query:  671 YPCTPGTKYYGPRAIPIYWN 730
            +PC PG KYYG   I I +N
Sbjct:  186 WPCAPGQKYYGRGPIQISYN 205          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 41/133 (30.83%), Postives = 60/133 (45.11%), Query Frame = 3
Query:  354 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            ++S      QF+     RN     A GF+ Y +F+ A   +   GFGTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   S  YC  S ++  P         +G    +   NYG  G
Sbjct:   24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFP--GFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQW--PCAPGKRYYGRGPIQLSHNYNYGPAG 152          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 44/124 (35.48%), Postives = 56/124 (45.16%), Query Frame = 3
Query:  384 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  P         +G    +   NYG  G
Sbjct:   61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCG 180          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 44/124 (35.48%), Postives = 56/124 (45.16%), Query Frame = 3
Query:  384 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  P         +G    +   NYG  G
Sbjct:   83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCG 202          
BLAST of EY680380 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.013e-11
Identity = 38/123 (30.89%), Postives = 58/123 (47.15%), Query Frame = 3
Query:  384 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNPEMSPSQSYCDDSYKYLIPAPLELNTMAQGLYLYTGTKNYGTPG 752
            F+     RN     A GF+ Y +F+ A   +   GFGTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  P     +   +G    +   NYG  G
Sbjct:   89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAG 207          
The following BLAST results are available for this feature:
BLAST of EY680380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CHI10_ORYSJ2.869e-1436.17Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHID_SOLLC5.065e-1434.81Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIB_ARATH1.128e-1333.06Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_BRANA1.128e-1333.87Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA4.288e-1333.87Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI3_TOBAC6.597e-1333.65Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI2_HORVU4.741e-1230.8326 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI2_GOSHI1.056e-1135.48Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI1.056e-1135.48Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIA_SECCE4.013e-1130.89Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-E01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680380 ID=EY680380; Name=EY680380; organism=Citrus sinensis; type=EST; length=856bp
CCACGCGTCCGCCACCGTTGATTTCTCCAACAGTGTTCGACATTTAAACA
ACTCGTCTTACGGAACCTGAAAAGGACGCTGCATCCGCCTTGTCAAATCC
CTTGCTTCCCATTTCTCTCATCTTCCCCCAAGTGAATCTCGAAACAACAG
GTAGATCTGGTGAGAACGAGAAAATGAAGATGAAGAATGGCAGTGTGGCA
ATGACACTGACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCAAA
TGGAGATGAATCAGAGAAGGTGATAGTGAAGAAGTTGAAGGGGAAAAAAG
TTTGCATAAAAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTAAC
GAGACGATATCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTCTC
GAAAAGGAACACGCCGGTGGCACATGCCGTGGGATTCTGGGATTATCAGT
CTTTCATTACTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCACC
GGTACTAAGCTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCACGT
GGGCTGCAAGACCTCTTGTGGATATGGAGTGGCCACTGGAGGACCATTGG
CCTGGGGACTTTGCTACAACCCTGAAATGAGCCCCAGTCAGTCATATTGT
GATGATTCCTACAAATACCTTATCCCTGCACCCCTGGAACTAAATACTAT
GGCCCAAGGGCTATACCTATATACTGGAACTAAAAACTATGGAACCCCTG
GGGAAGCATTAAAGGCAGATTTGTTGAAACCCCCCCCAAAAAATTGAAAC
AAAAAGGCCACCCTTGGCCTTTGAGGGCGCCATTTTGGAAAAGGGGAAGA
ACCCCC
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