EY680379

Overview
NameEY680379
Unique NameEY680379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length442
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680379 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 8.313e-30
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 PPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 204
            PP+KVKGLWLFRG EIP FVM+ECYDMELY+W K D+SDE QKERVNQ+IED EPFEGEALLDAKCFK
Sbjct:  355 PPFKVKGLWLFRGQEIPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422          
BLAST of EY680379 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 8.313e-30
Identity = 59/68 (86.76%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 PPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 204
            PP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGEALLDAKCFK
Sbjct:  351 PPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418          
BLAST of EY680379 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.086e-29
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
Query:    4 PYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 204
            P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  347 PFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413          
BLAST of EY680379 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.086e-29
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
Query:    4 PYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 204
            P+KVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  348 PFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414          
BLAST of EY680379 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.852e-29
Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 PPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 204
            PP+KVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGE+LLDAKCFK
Sbjct:  351 PPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418          
BLAST of EY680379 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.568e-28
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 PPYKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 204
            PP+KVKGLWLFRG +IPKFVMDE YDMELY+W K D+SDE QKERVN MIED EPFEGE LLDAKCFK
Sbjct:  349 PPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416          
The following BLAST results are available for this feature:
BLAST of EY680379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
EF1G_PRUAV8.313e-3083.82Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]
EF1G1_ORYSJ8.313e-3086.76Elongation factor 1-gamma 1 OS=Oryza sativa subsp.... [more]
EF1G2_ARATH1.086e-2986.57Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]
EF1G1_ARATH1.086e-2986.57Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]
EF1G2_ORYSJ1.852e-2985.29Elongation factor 1-gamma 2 OS=Oryza sativa subsp.... [more]
EF1G3_ORYSJ1.568e-2882.35Elongation factor 1-gamma 3 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-D12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680379 ID=EY680379; Name=EY680379; organism=Citrus sinensis; type=EST; length=442bp
CCTCCATACAAAGTCAAGGGGTTGTGGCTCTTCCGTGGCCCAGAAATTCC
TAAATTCGTCATGGATGAGTGCTATGACATGGAATTGTATGACTGGAAGA
AGGCTGACATCTCAGACGAAGAGCAAAAGGAACGTGTGAACCAGATGATC
GAGGATCACGAGCCTTTTGAGGGTGAAGCTCTTTTGGATGCTAAGTGCTT
CAAGTGATGAGCTTAATCTTTTTTCTAGTTTTAAGATGTTCATGTTTGTC
TTTGGTTATTGGTAGAGTTTGTTTGTGTTTCGAATTCAGAAAGATCGAAG
TCTAGTATTTTGTGTTATAGTATTAACTTATAATTTTGTCGCAATTTTGA
GGATGATTTGGACATCTTTTTAATACAAGTTTCAATGGTTCTTGAATGAT
ATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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