EY680341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680341 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 8.454e-77 Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAGKSGRMCAGAIIGRVREWNRMINEGDLRNF 455 YAIAFQER++IPDEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFA KSGRMCA AI+ + +MI+EGDLR + Sbjct: 229 YAIAFQERIRIPDEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDEGDLRKY 379 HSP 2 Score: 32.3426 bits (72), Expect = 8.454e-77 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 443 LEEFLEKWEKTYGQLKRVREVWEKGFY 523 L ++LEKW+KTY RV +V +K FY Sbjct: 376 LRKYLEKWDKTYLPTYRVLDVLQKVFY 402
BLAST of EY680341 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.123e-68 Identity = 125/151 (82.78%), Postives = 131/151 (86.75%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAGKSGRMCAGAIIGRVREWNRMINEGDLRNF 455 YAIAFQER+KI D+KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA KI GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFA KSGRMCA AI+ RM++E DLR + Sbjct: 226 YAIAFQERIKISDDKMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEMGKRMVDESDLRKY 376
BLAST of EY680341 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 2.502e-68 Identity = 123/151 (81.46%), Postives = 131/151 (86.75%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAGKSGRMCAGAIIGRVREWNRMINEGDLRNF 455 YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGDAAGYVTKCSGEGIYFA KSGRMCA AI+ RM+ E DLR + Sbjct: 225 YAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRY 375
BLAST of EY680341 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.273e-53 Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAGKSGRMCAGAIIGRVREWNRMINEGDLRNF 455 YAIAFQER+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFA KS RMCA I+ R+ E DL+ + Sbjct: 175 YAIAFQERIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKARIKDLQAGIRTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAETIVATSNNGQRVPTEADLKQY 326
BLAST of EY680341 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13 Identity = 49/129 (37.98%), Postives = 62/129 (48.06%), Query Frame = 3 Query: 12 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAGKSGRMCAGA 395 A+ E +K P Y ++Y +SPDFYGWVFP ++G G T D+ T R + + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR A A Sbjct: 167 AYHEIIKAPTTVANYDPTRCDVYYDGRISPDFYGWVFPHGKTASIGMG--TELPDVSLKDCTTLLRQMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYAAEA 293 The following BLAST results are available for this feature:
BLAST of EY680341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680341 ID=EY680341; Name=EY680341; organism=Citrus sinensis; type=EST; length=531bpback to top |