EY680321

Overview
NameEY680321
Unique NameEY680321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680321 vs. ExPASy Swiss-Prot
Match: TMP14_ARATH (Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.628e-39
Identity = 88/164 (53.66%), Postives = 104/164 (63.41%), Query Frame = 3 
Query:   66 TLVDAKAP-RQSAPASTQCXXXXXXXXXXXXXXXXXWKATTYCRKMARNVMAMAT---GEAPA---EVAATELPEIVKTVQEAWDKVEDKYAVTSLAVTVAIAVWGSTGMISAIDRXXXXXXXXXXXXIGYTGWFAYKNLVFKPDREALIQKIKDTYKDIIGST 536
            T++D++AP  + A AS                     KAT YCRK+ RNV+  AT   GEAPA   E   TELPEIVKT QEAW+KV+DKYA+ SLA    +A+WGS GMISAIDR            IGYTGWF YKNLVFKPDREAL +K+K TYKDI+GS+
Sbjct:   11 TIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
The following BLAST results are available for this feature:
BLAST of EY680321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TMP14_ARATH3.628e-3953.66Thylakoid membrane phosphoprotein 14 kDa, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-G11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680321 ID=EY680321; Name=EY680321; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGTCACAGGATCCCGTAGCCATGGCCTCCAGCGCACTCTCA
ATCTCTTCCTCCTCAACTCTTGTTGATGCCAAGGCTCCTCGCCAGTCCGC
TCCTGCCTCAACACAATGTGTGTCTCTTCCTACACTCCCACCACCGCCGG
TTCCCTCTCAAACCCGCCCTTGGAAGGCAACTACTTATTGTCGAAAGATG
GCCCGCAATGTCATGGCTATGGCAACAGGGGAGGCTCCAGCTGAAGTTGC
TGCAACTGAGCTTCCAGAGATTGTCAAGACCGTGCAAGAAGCTTGGGACA
AAGTTGAAGATAAGTATGCAGTGACTTCACTTGCTGTAACTGTTGCTATT
GCCGTATGGGGCTCTACGGGAATGATTTCGGCAATTGATAGGCTTCCTTT
AGTTCCTGGAGTTCTCGAGCTTGTCGGCATTGGCTACACCGGGTGGTTTG
CATACAAGAACCTGGTTTTCAAACCAGACAGGGAAGCATTAATACAGAAA
ATAAAAGACACATACAAGGATATAATAGGGAGCACCTGAAGGAAACCAAA
GGAATAGTACGGCTGCTGAAATGATGAGGTAAAAGTTTCACTTTTTGAAC
CGAATATCTTGCAGCATTAATTGAGAATAAAGAATGAAAACAACAATGGT
TCTTCTGTTGGCATTTATTTCATAACCAAATAATTTAAAAACTCATGTGA
AGTACTTCATCCCTTTAAAAAAAAAAAAAAAAAAGGGCGGCCCGCCCAAA
AAAAAACAAACTTAACAAAAGAGTGGAAAGCAAAATCCAAAACCCCTTCA
AAATTAGCAAACAAAAATTCCAATTTCTGAGGGCCCCGCTTTTTTAAACA
GCTCCAGTAATGTGGGAAAAACCCCTG
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