EY680316

Overview
NameEY680316
Unique NameEY680316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680316 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 2 
Query:   14 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGYVLL 139
            ETG++DV  KVLYCGICH+DL  +KNEWGFS +P+VPG+ ++
Sbjct:   32 ETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIV 73
[Close]
BLAST of EY680316 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 26/42 (61.90%), Postives = 36/42 (85.71%), Query Frame = 2 
Query:   14 ETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGYVLL 139
            ETG++DVR KVL+CGICH+DL  +KNEWG S +P+VPG+ ++
Sbjct:   30 ETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEIV 71
The following BLAST results are available for this feature:
BLAST of EY680316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MTDH_FRAAN2.549e-1164.29Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH8_ARATH7.416e-1161.90Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-G06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680316 ID=EY680316; Name=EY680316; organism=Citrus sinensis; type=EST; length=896bp
CCACGCGTCCGGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGTATGTACTCCTGATCTATCCATC
CTTCAATTTTTGTTTCTTTTGCATTTTTTTTCTTTTGTTTTTGTTTCGGA
TCAAACCGAGCTGCGTAGTAACAGGCTGTTGTTTCCGTCACAGCGCTTCC
TGATTATTAACTACGGTACTTTCCTGTGTATACAGAAAGAAATTAACCAA
GGCCATGGCTTTAGGATCTTTTAATTTGATGCAAATCGTTCCCCATCCTA
TTTAATTCAATCTTGTATGGGGTTGCTATTGAAATATTGGTAATGAGGAT
TTTAATCTTACCGTTTCATATTTGATGTGATGAATAACTGGAATCTCCTG
TTAAAAGTGACAAATATATATATATATACGTGTCATTTTCTTACAACAAA
TTAAACAAAAATAGAGACACGCAAATTTTAATATAATATAAAATAAAATA
TATTGGATGAAAATATGTATTTTTCTTATACATTATCTTCATAACTCTTG
GTAGATTTATACTCTCTATCTTATAAATAAAGGGTGGAAATAACAATTAA
CTCAATTAAAGCGTTCTTAGCATAGATATCTTTTTTTTTCCAGTAAAATT
AATTTATTTCCATTTGACTCTGTAAATTTTTTAAATGTCCCAGTGTAATG
GGATTGGGCTAACCCAATTGGTTAAGGAAAAATGAATTGGAAATTTGAAT
TTGCTTTCAAATAAAGAACTTTGAAATTTACAAATTTTCCAATTTTCTTT
TTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGCGGGGC
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