EY680312

Overview
NameEY680312
Unique NameEY680312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 4.742e-92
Identity = 171/236 (72.46%), Postives = 193/236 (81.78%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKW-NKLQRIGQPNLM*NGFLVGG 770
            M RKFFVGGNWKCNGTSEEVKKIV+ LNEAE                     K+LLR+DFHVAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRALLNESN+FVGDK AYALS+GLKVIACVGETLEQRE+GST++VVA QTKAIAEK+S+W N+V+AYEPVWAIGTGKVA+PAQAQEVH ELRKW+K+NV A+VA S RII+G      N  +  GQP++  +GFLVGG
Sbjct:    1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPAQAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDI--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.757e-89
Identity = 169/236 (71.61%), Postives = 191/236 (80.93%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            M RKFFVGGNWKCNGT+EEVKKI++TLN A+                     K+ LR DFHVAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERRALL ESN+FVGDKVAYALS+GLKVIACVGETLE+RESGST+ VVA QTKAIA+++ +W NVV+AYEPVWAIGTGKVA+PAQAQEVHAELRKWL  NVS EVAASTRII+G        + + GQP++  +GFLVGG
Sbjct:    1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHAELRKWLAANVSPEVAASTRIIYGGSVNGANCKELGGQPDV--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 4.907e-89
Identity = 167/236 (70.76%), Postives = 193/236 (81.78%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            MARKFFVGGNWKCNGT+EEVKKIV+TLNEA+                     KS LRSDF VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRA+LNES++FVGDKVAYAL++GLKVIACVGETLE+RE+GST+ VVA QTKAIA++++NW NVV+AYEPVWAIGTGKVA+PAQAQEVH ELRKWL  NVSA+VAA+TRII+G        + + GQ ++  +GFLVGG
Sbjct:    1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADV--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 321.627 bits (823), Expect = 3.517e-87
Identity = 166/236 (70.34%), Postives = 185/236 (78.39%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIH-GRFCKWNKLQRIGQPNLM*NGFLVGG 770
            M RKFFVGGNWKCNGT+++V+KIV TLNE +                     KS LR +FHVAAQNCWV+KGGAFTGEVSAEMLVNL +PWVILGHSERRALL ESN+FVGDKVAYALS+GLKVIACVGETLEQRE+GST+ VVA QTKAIAEKI +W NVV+AYEPVWAIGTGKVATPAQAQEVHA LR WLK N S EVA STRII+ G     N  +   QP++  +GFLVGG
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVHASLRDWLKTNASPEVAESTRIIYGGSVTAANCKELAAQPDV--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 307.76 bits (787), Expect = 5.255e-83
Identity = 162/236 (68.64%), Postives = 182/236 (77.12%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIH-GRFCKWNKLQRIGQPNLM*NGFLVGG 770
            M RKFFVGGNWKCNGT+++V KIV  LNE +                     KS LR +  VAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERR+LL ESN+FVGDKVAYALS+GLKVIACVGETLEQRESGST+ VVA QTKAI+E+I +W NVV+AYEPVWAIGTGKVATP QAQEVH  LRKWL  NVSAEVA STRII+ G     N  +   +P++  +GFLVGG
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELAAKPDV--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 302.753 bits (774), Expect = 1.691e-81
Identity = 157/236 (66.53%), Postives = 181/236 (76.69%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            M RKFFVGGNWKCNGT  +V+ IV+TLN  +                     K  LR +  VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERR+LL ES++FVG+KVAYAL++GLKVIACVGETLEQRE+GST+ VVAEQTKAIA+KI +W NVV+AYEPVWAIGTGKVA+PAQAQEVHA LR WLK NVS EVA STRII+G        + +  QP++  +GFLVGG
Sbjct:    1 MGRKFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQPDV--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 298.13 bits (762), Expect = 4.164e-80
Identity = 155/236 (65.68%), Postives = 178/236 (75.42%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGG 770
            M RKFFVGGNWKCNGT E+V+ IV TLN  +                     K+ LR +  VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERR+LL ES++FVG+KVAYAL++GLKVIACVGETLEQRE+GST+ VVAEQTKAIA KI +W N V+AYEPVWAIGTGKVATPAQAQEVHA LR WLK NVS EVA STRII+G        + +  Q ++  +GFLVGG
Sbjct:    1 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIAGKIKDWSNGVVAYEPVWAIGTGKVATPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQADV--DGFLVGG 234          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.119e-72
Identity = 136/174 (78.16%), Postives = 154/174 (88.51%), Query Frame = 3
Query:  249 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGG 770
            VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERRALLNE+N+FVGDKVAYALS+GLKVIACVGETLEQRE+G+T+ VVA QTKAIA+KIS+WDNVVLAYEPVWAIGTGKVA+PAQAQEVHA LRKW  DNVSAEV+ASTRII+G     +  + +G    + +GFLVGG
Sbjct:    3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAIGTGKVASPAQAQEVHAGLRKWFCDNVSAEVSASTRIIYGGSVSGSNCKELGGQTDV-DGFLVGG 175          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.939e-69
Identity = 142/245 (57.96%), Postives = 161/245 (65.71%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            M RKFFVGGNWKCNGT E V KIV TLNE                        + L+ +  VAAQNCWV+KGGAFTGEVSA+ML NL I WVILGHSERR LL ESN+FVG K AYA S GL VIAC+GE LE+RE+G T  V  +Q K+ A      WDNVV+AYEPVWAIGTGKVA+P QAQEVH  +R WLK NVS EVA+ TRII+G      N L    Q ++  +GFLVGG   K   F
Sbjct:    1 MGRKFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQEDV--DGFLVGGASLKGPEF 243          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.878e-64
Identity = 129/248 (52.02%), Postives = 160/248 (64.52%), Query Frame = 3
Query:   57 IVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            +V MA   KFFVGGNWKCNGT E + K+VS LN A                      KS L     ++AQNCW+ KGGAFTGE+S E L +L   WVILGHSERR ++ E N+F+G K AYAL++G+ VIAC+GE LE+RE+G T  V  +Q KA A+ + +WDNVV+AYEPVWAIGTGKVA+P QAQEVH  +R WLK NVS EVA+ TRII+G          + +   + +GFLVGG   K   F
Sbjct:   64 VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQV--KSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDI-DGFLVGGASLKGPEF 308          
The following BLAST results are available for this feature:
BLAST of EY680312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_COPJA4.742e-9272.46Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_PETHY3.757e-8971.61Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_ARATH4.907e-8970.76Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_MAIZE3.517e-8770.34Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ORYSJ5.255e-8368.64Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_SECCE1.691e-8166.53Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_HORVU4.164e-8065.68Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_LACSA7.119e-7278.16Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_STELP1.939e-6957.96Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIC_SPIOL1.878e-6452.02Triosephosphate isomerase, chloroplastic OS=Spinac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680312 ID=EY680312; Name=EY680312; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCTCGTATTTTCGTCTCGCTTTCATCGCCAAACCAAACAA
AATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGGCGGCAACTGGAA
ATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTTCTACATTGAATG
AAGCTGAAGTTCCTTCTGAGGATGTTGTGGAGGTTGTTGTAAGCCCTCCG
TTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTCTGATTTCCATGT
TGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTTTTACCGGGGAAG
TTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGGGTCATTCTTGGT
CATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAATGATTTTGTTGGAGA
TAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCATTGCTTGTGTTG
GAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTGGCTGTTGTGGCT
GAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGACAATGTTGT
GTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGGTTGCAACCC
CTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGGCTTAAAGAC
AATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCATCCACGGGAGGTT
CTGTAAATGGAACAAATTGCAAAGAATTGGGCAGCCCAACCTGATGTAAA
ATGGTTTTTTGGTTGGGGGGAACTTCCCTAAAGCCCGGAATTTCTTCCAT
ATTTTTCAAGTCGGCCCCCAATGGAAAAAAAAATTTAAATTAAAAACCAA
ACCACCCCGGGTTTGGCT
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