EY680310

Overview
NameEY680310
Unique NameEY680310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.312e-19
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 2
Query:   11 AVGVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE 118
            A+G YSEREGYKGSEY PTYEDKDGDWMLVGDVPW+
Sbjct:  137 AIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 172          

HSP 2 Score: 40.4318 bits (93), Expect = 1.312e-19
Identity = 18/20 (90.00%), Postives = 20/20 (100.00%), Query Frame = 1
Query:  232 MFMSSCKRLRIMKGSEARGL 291
            MF++SCKRLRIMKGSEARGL
Sbjct:  173 MFVTSCKRLRIMKGSEARGL 192          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.818e-18
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 2
Query:   14 VGVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE 118
            +G YSEREGYKGSEY PTYEDKDGDWMLVGDVPW+
Sbjct:  131 IGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 165          

HSP 2 Score: 38.1206 bits (87), Expect = 1.818e-18
Identity = 16/20 (80.00%), Postives = 20/20 (100.00%), Query Frame = 1
Query:  232 MFMSSCKRLRIMKGSEARGL 291
            MF++SCKRLRIMKG+EA+GL
Sbjct:  166 MFVTSCKRLRIMKGTEAKGL 185          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.522e-17
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 2
Query:   11 AVGVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE 118
            +VG Y ER+GYKGS++ PTYEDKDGDWML+GDVPWE
Sbjct:  130 SVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWE 165          

HSP 2 Score: 38.1206 bits (87), Expect = 5.522e-17
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  226 YRMFMSSCKRLRIMKGSEARGL 291
            + MF+ +CKRLRIMKGSEA+GL
Sbjct:  164 WEMFICTCKRLRIMKGSEAKGL 185          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.291e-15
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 2
Query:   14 VGVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE 118
            +G Y EREGYKGS + PTYEDKDGDWMLVGDVPW+
Sbjct:  116 IGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWD 150          

HSP 2 Score: 35.039 bits (79), Expect = 1.291e-15
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  232 MFMSSCKRLRIMKGSEARGLTAN 300
            MF SSCKRLRIMKGS+A  L ++
Sbjct:  151 MFSSSCKRLRIMKGSDAPALDSS 173          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.682e-15
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 2
Query:   14 VGVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE 118
            VG YSEREGYKGS + PTYEDKDGDWMLVGDVPW+
Sbjct:  113 VGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWD 147          

HSP 2 Score: 32.3426 bits (72), Expect = 1.682e-15
Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 1
Query:  232 MFMSSCKRLRIMKGSEA 282
            MF SSC++LRIMKGSEA
Sbjct:  148 MFSSSCQKLRIMKGSEA 164          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.816e-13
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 2
Query:   47 GSEYEPTYEDKDGDWMLVGDVPWE 118
            GSEY PTYEDKDGDWMLVGDVPWE
Sbjct:  222 GSEYVPTYEDKDGDWMLVGDVPWE 245          

HSP 2 Score: 37.7354 bits (86), Expect = 8.816e-13
Identity = 17/22 (77.27%), Postives = 19/22 (86.36%), Query Frame = 1
Query:  226 YRMFMSSCKRLRIMKGSEARGL 291
            + MF+ SCKRLRIMKGSEA GL
Sbjct:  244 WEMFVESCKRLRIMKGSEAIGL 265          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.277e-12
Identity = 38/74 (51.35%), Postives = 42/74 (56.76%), Query Frame = 2
Query:   17 GVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE*VL*FSLSREISWVLIYLYISSCPKLT*FIVVCAVATGCL 238
            G YSEREGY GSEY PTYEDKDGDWMLVGDVPW                  +++SSC +L       A   GCL
Sbjct:  147 GEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWN-----------------MFVSSCKRLRIIKGSEAKGLGCL 203          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 2
Query:   11 AVGVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE*VL*FSLSREISWVLIYLYISSCPKL 196
            +VG Y EREGYKGS++ PTYEDKDGDWMLVGDVPWE                 +++SSC +L
Sbjct:  126 SVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWE-----------------MFVSSCKRL 170          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 2
Query:   17 GVYSEREGYKGSEYEPTYEDKDGDWMLVGDVPWE*VL*FSLSREISWVLIYLYISSCPKL 196
            G YSEREGY GSEY PTYEDKDGDWMLVGDVPW                  +++SSC +L
Sbjct:  137 GEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWN-----------------MFVSSCKRL 179          
BLAST of EY680310 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 3.276e-12
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 2
Query:   47 GSEYEPTYEDKDGDWMLVGDVPWE 118
            GS+Y PTYEDKDGDWMLVGDVPWE
Sbjct:  181 GSDYVPTYEDKDGDWMLVGDVPWE 204          

HSP 2 Score: 36.965 bits (84), Expect = 3.276e-12
Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 1
Query:  226 YRMFMSSCKRLRIMKGSEARGL 291
            + MF+ SCKR+RIMKGSEA GL
Sbjct:  203 WEMFVDSCKRIRIMKGSEAIGL 224          
The following BLAST results are available for this feature:
BLAST of EY680310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AX22B_PHAAU1.312e-1988.89Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA4_PEA1.818e-1888.57Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA... [more]
IAA3_ARATH5.522e-1777.78Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
IAA2_ARATH1.291e-1580.00Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
IAA1_ARATH1.682e-1585.71Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA30_ORYSJ8.816e-1395.83Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
AX22E_PHAAU1.277e-1251.35Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
IAA4_ARATH2.179e-1254.84Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]
AX22D_PHAAU2.845e-1256.67Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
IAA16_ARATH3.276e-1291.67Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680310 ID=EY680310; Name=EY680310; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCCGTCGGTGTGTACTCCGAAAGAGAAGGCTACAAAGGAT
CTGAATATGAACCTACTTATGAAGACAAAGATGGCGACTGGATGCTTGTG
GGAGACGTCCCATGGGAGTAAGTTCTTTAATTTTCTCTTTCTCGTGAAAT
ATCTTGGGTGCTTATATATTTATATATATCATCTTGTCCTAAACTCACAT
GATTCATTGTTGTTTGTGCTGTTGCTACAGGATGTTTATGTCGTCATGCA
AGAGATTGAGAATCATGAAAGGATCAGAAGCAAGAGGACTCACAGCAAAT
TAATATATTAATTAACAGATGATAATAGAGAATGACGAAAAGATAAAAGA
TTTGTGATCTCATGGGGAGCGTGCAAATCTTTTCTTTGATCAGCTGCTTG
GGTTCTCGGAAGAAGATCAAAATTTTCAGATCTGGGTTCATGATCTTGTT
TTCTCCCTCGATATGGGTATCGGGGAGTTAATTACTAGACGGCATGCAAA
ATTAAACAGGCAAAAATTAAGCATATAGAGAAGTTGAAGTTTTTTTCTGT
TGGACTCAGGTTTGACATCAAGATGCAATTTGATGCATGGTTCTAACCTT
CAATTGTCTTTGTGGTTGTTCCCAAGCCCTTCTAATTGGAAACTACATTA
CCCGCGAACTTAATGGTTGCCGCTTCATCAAAGGCAACTGGTAAAAAAAA
AATGAATTGTTTAAGGTTTCGGGTTTTGAAATAAAAAAATAAATTAAACA
AGTATTAGTCAGGGAGGGGGAAACAGAAAGGGGGTGGTCCTTGGAACTTT
CTATATTTTTTTTTTCTTTTTTCTCCCCAACCACAAAGCGAGACACCCGT
AAGAGGAGAAAAAAAAA
back to top