EY680281

Overview
NameEY680281
Unique NameEY680281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.502e-32
Identity = 70/100 (70.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQCS 306
            IGGSANPTINSQGNRY AP N FAKEVTKRVDT AS WKGWNWRSEGDLL NGAYFT                  KSSS+VG ITS AGAL CR+ RQCS
Sbjct:  331 IGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAGALPCRRGRQCS 430          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 64/99 (64.65%), Postives = 70/99 (70.71%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSA PTINSQGNRY AP++ FAKEVTKRV+T AS+WK WNWRSEGDLLLNGA+F P                 K SSMV +ITS AGAL CRK R C
Sbjct:  372 IGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26
Identity = 59/99 (59.60%), Postives = 68/99 (68.69%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSA PTINSQGNR+ AP+N FAKEVTKR  T  S+WK WNWRSEGDL LNGA+FT                  KSSS+VG++TS +GAL CR  R+C
Sbjct:  318 IGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.778e-25
Identity = 57/99 (57.58%), Postives = 65/99 (65.66%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSANPTINSQGNR+ AP   F+KEVTK  D   S+WK WNWRS GDLLLNGA+FTP                 K SS+VG +TS +GAL CRK  +C
Sbjct:  310 IGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.778e-25
Identity = 57/99 (57.58%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSANPTINSQGNR+ AP N FAKEVTKRV     +W  WNWRS+GDL+LNGAYFT                  KSSS+VG +TS +GAL CR    C
Sbjct:  320 IGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLVGMLTSSSGALKCRIGTLC 418          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25
Identity = 59/99 (59.60%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSA+PTINSQGNRY AP N FAKEVTKR      QW+ WNWRSEGDL LNGA+FT                  KSSS+VG IT  AGAL CR  R+C
Sbjct:  319 IGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFLNGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRRC 417          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSANPTINSQGNR+ AP N  AKEVTKR+DT  ++W  WNWRSE DLL+NGA+FTP                 K +SMV +IT+ AGAL+CR+ + C
Sbjct:  354 IGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTP-SGEGASGDSQTLSLPAKPASMVDAITASAGALSCRRGKPC 451          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23
Identity = 55/99 (55.56%), Postives = 63/99 (63.64%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSA PTINSQGNR+ AP +   KEVTK  D   S+WK WNWRSEGDL LNGA+FTP                 + SS+V S+TS AGAL CRK  +C
Sbjct:  310 IGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23
Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSANPTINSQGNR+ AP N FAKEVTKRV +   +WK WNWRS+GDL+LNGAYFT                  K +S+V  +T  +GAL CR   +C
Sbjct:  342 IGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440          
BLAST of EY680281 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.839e-23
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    7 IGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 303
            IGGSA+PTI SQGNR+ AP   F KEVTK  D   S+W+ WNWRSEGD+LLNGAYF                   + SS+VGSIT+ AG L+CR+ R+C
Sbjct:  311 IGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 409          
The following BLAST results are available for this feature:
BLAST of EY680281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PEL1_ARATH1.502e-3270.00Probable pectate lyase 1 OS=Arabidopsis thaliana G... [more]
PEL15_ARATH4.522e-2964.65Probable pectate lyase 15 OS=Arabidopsis thaliana ... [more]
PEL8_ARATH2.100e-2659.60Probable pectate lyase 8 OS=Arabidopsis thaliana G... [more]
PEL18_ARATH1.778e-2557.58Probable pectate lyase 18 OS=Arabidopsis thaliana ... [more]
PEL14_ARATH1.778e-2557.58Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
PEL20_ARATH3.961e-2559.60Probable pectate lyase 20 OS=Arabidopsis thaliana ... [more]
PEL9_ARATH1.966e-2456.57Probable pectate lyase 9 OS=Arabidopsis thaliana G... [more]
PEL5_ARATH1.664e-2355.56Probable pectate lyase 5 OS=Arabidopsis thaliana G... [more]
PEL10_ARATH1.664e-2354.55Probable pectate lyase 10 OS=Arabidopsis thaliana ... [more]
PEL11_ARATH2.839e-2353.54Putative pectate lyase 11 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-D07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680281 ID=EY680281; Name=EY680281; organism=Citrus sinensis; type=EST; length=884bp
ATGCNCATTGGTGGAAGTGCAAACCCCACCATCAACAGCCAGGGAAACAG
ATACAATGCTCCATTGAATGCCTTCGCAAAGGAGGTAACAAAGAGGGTGG
ACACAGCTGCAAGCCAGTGGAAGGGCTGGAACTGGAGATCTGAAGGAGAC
CTCTTGCTGAACGGTGCCTACTTTACCCCATCCGGAGCAGGAGCCTCAGC
TAGCTATGCTCGTGCTTCAAGCTTGGGAGCCAAGTCTTCCTCCATGGTTG
GATCCATTACTTCTGGTGCTGGTGCTCTTACTTGCCGCAAGAGCCGTCAG
TGCTCATAGTATTCATCATTAAATTGGCCGAAAAAAGAAATGGCCATCGA
ATTTCTGTTTTGTTTTTCATTTTTCTTCTATATAGTATATCACCTATCCA
ATTTATCCACAATCTGGTCATTGTTTCAATCTCTACCGTATATCTGCTTC
ACATATTTTGACAAGTGTACATTATTGCACATGTCATTGTATTGCCTCAC
CCAGTTTGTTTATCAGTTACTTGCTCAACCTCGGCCTGCTTCAACTGAAA
AAACAAACATTTGCATTCCCCAGAAGCAGGTGCGGAAGTGTTGTTCATTT
TATTTTCCCTCTTTGGCCCTCTTTTTTCAGCCTCAATTCTCATTTCCCTT
CCTAACTAGCACTTGCCTATTTGTGTCCAGTGTCAGTCAGCTGTCAACTG
TCCATCTTGGTCTCTCCACCTACTCCTCTTTTTCATTTTGGGCTTTTGGG
TTTAAAAGGGTCCGGAATGATTTTGTGGTTTTTTTCCCCCCCCCCCCCTT
GGTTGTGGCCTAGCCCAAATAATCCCACATTTTTTTGAAAGCCAAAAACT
TTGGATTATTTAAAAAAAAGGGAACTTTTGTTAA
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