EY680280

Overview
NameEY680280
Unique NameEY680280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length408
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 6.295e-66
Identity = 122/134 (91.04%), Postives = 128/134 (95.52%), Query Frame = 2
Query:    5 MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            MEE+  LR + CRAKG A GFKVAILGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN
Sbjct:   25 MEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 158          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 4.080e-65
Identity = 121/134 (90.30%), Postives = 126/134 (94.03%), Query Frame = 2
Query:    5 MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP AIVN
Sbjct:   25 MEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVN 158          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 6.960e-65
Identity = 120/134 (89.55%), Postives = 126/134 (94.03%), Query Frame = 2
Query:    5 MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP AIVN
Sbjct:   25 MEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVN 158          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 4.988e-63
Identity = 115/133 (86.47%), Postives = 126/133 (94.74%), Query Frame = 2
Query:    8 EENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            E++ CL+++ CRAKGG +GFKVAILGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+AL GMDLVIIPAGVPRKPGMTRDDLFNINAGIV+TLCE IAKCCP AIVN
Sbjct:   23 EDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVN 155          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 7.963e-61
Identity = 115/132 (87.12%), Postives = 119/132 (90.15%), Query Frame = 2
Query:   11 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            + S L +  CRAKGG+ GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL E IAKCCP AIVN
Sbjct:   25 DGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVN 156          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 8.804e-60
Identity = 110/132 (83.33%), Postives = 121/132 (91.67%), Query Frame = 2
Query:   11 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIV+TLCEG+AKCCPNAIVN
Sbjct:   29 KNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVN 160          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 8.804e-60
Identity = 111/132 (84.09%), Postives = 120/132 (90.91%), Query Frame = 2
Query:   11 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            +NS +    CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIVRTLCEG+AKCCPNAIVN
Sbjct:   29 KNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVN 160          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.150e-59
Identity = 109/132 (82.58%), Postives = 121/132 (91.67%), Query Frame = 2
Query:   11 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNAIVN
Sbjct:   25 KNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVN 156          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.179e-42
Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 2
Query:   68 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA+VN
Sbjct:   36 KVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNAVVN 148          
BLAST of EY680280 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.716e-42
Identity = 80/113 (70.80%), Postives = 96/113 (84.96%), Query Frame = 2
Query:   68 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVN 406
            KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA++N
Sbjct:   36 KVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALIN 148          
The following BLAST results are available for this feature:
BLAST of EY680280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDHG_ORYSJ6.295e-6691.04Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG_CUCSA4.080e-6590.30Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG_CITLA6.960e-6589.55Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_SOYBN4.988e-6386.47Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG2_ARATH7.963e-6187.12Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG2_BRANA8.804e-6083.33Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA8.804e-6084.09Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG1_ARATH1.150e-5982.58Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHM_EUCGU2.179e-4271.68Malate dehydrogenase, mitochondrial OS=Eucalyptus ... [more]
MDHM_CITLA3.716e-4270.80Malate dehydrogenase, mitochondrial OS=Citrullus l... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-D06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680280 ID=EY680280; Name=EY680280; organism=Citrus sinensis; type=EST; length=408bp
GTAAATGGAGGAGAATTCTTGCTTGAGGCAAGCTAAATGCCGGGCAAAAG
GCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGGTGCTGCTGGAGGCATT
GGTCAACCCCTTGCAATGCTAATGAAGATAAACCCCCTGGTCTCAGTCCT
TCACCTCTATGATGTTGTCAATACCCCTGGTGTCACTGCTGATATTAGCC
ATATGGACACCGGCGCTGTGGTACGGGGTTTCCTAGGCCAGCCACAGCTT
GAGAATGCTCTCACAGGGATGGACCTTGTCATTATCCCTGCCGGCGTTCC
GAGGAAGCCTGGAATGACCAGGGATGATCTTTTCAATATCAATGCTGGAA
TTGTCAGGACACTCTGTGAAGGCATCGCAAAGTGTTGCCCCAATGCGATT
GTCAATTT
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