EY680275

Overview
NameEY680275
Unique NameEY680275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680275 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-28
Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  508 DYIGKKYVILFFYPLELPFVCPTKITAFSERYAKFENLNTKKLGGPT*QWGFPTLEWVQKNKKSRGAW*I*NTPVIAKTTKYNSKTQRVSEIPEKGNALEKKPLIYKK 831
            DYIGKKYVILFFYPL+  FVCPT+ITAFS+R+++FE LNT+ LG       F  L WVQ ++KS G   + N P+I+  TK  SK+  V  I ++G AL    +I K+
Sbjct:   99 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSV-DSVFSHLAWVQTDRKSGGLGDL-NYPLISDVTKSISKSFGVL-IHDQGIALRGLFIIDKE 203          

HSP 2 Score: 58.5362 bits (140), Expect = 2.077e-28
Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 2
Query:  236 LKSQVPRPVSLSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINV 394
            L+S   R  SLS  S SR+SF VKA  +  PLVGN APDF AEAVFDQEFI V
Sbjct:   45 LRSGFARRSSLS--STSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKV 95          
BLAST of EY680275 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-28
Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  508 DYIGKKYVILFFYPLELPFVCPTKITAFSERYAKFENLNTKKLGGPT*QWGFPTLEWVQKNKKSRGAW*I*NTPVIAKTTKYNSKTQRVSEIPEKGNALEKKPLIYKK 831
            DYIGKKYVILFFYPL+  FVCPT+ITAFS+R+++FE LNT+ LG       F  L WVQ ++KS G   + N P+I+  TK  SK+  V  I ++G AL    +I K+
Sbjct:   99 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSV-DSVFSHLAWVQTDRKSGGLGDL-NYPLISDVTKSISKSFGVL-IHDQGIALRGLFIIDKE 203          

HSP 2 Score: 58.5362 bits (140), Expect = 2.077e-28
Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 2
Query:  236 LKSQVPRPVSLSRGSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINV 394
            L+S   R  SLS  S SR+SF VKA  +  PLVGN APDF AEAVFDQEFI V
Sbjct:   45 LRSGFARRSSLS--STSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKV 95          
BLAST of EY680275 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.582e-28
Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  508 DYIGKKYVILFFYPLELPFVCPTKITAFSERYAKFENLNTKKLGGPT*QWGFPTLEWVQKNKKSRGAW*I*NTPVIAKTTKYNSKTQRVSEIPEKGNALEKKPLIYKK 831
            +YIGKKYVILFFYPL+  FVCPT+ITAFS+RY +FE LNT+ LG       F  L WVQ ++KS G   + N P+++  TK  SK+  V  IP++G AL    +I K+
Sbjct:  104 EYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSV-DSVFSHLAWVQTDRKSGGLGDL-NYPLVSDITKSISKSFGVL-IPDQGIALRGLFIIDKE 208          

HSP 2 Score: 55.0694 bits (131), Expect = 4.582e-28
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 2
Query:  278 SRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINV 394
            S SR++F VKA  +  PLVGN APDF AEAVFDQEFI V
Sbjct:   62 SASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKV 100          
BLAST of EY680275 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.771e-28
Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  508 DYIGKKYVILFFYPLELPFVCPTKITAFSERYAKFENLNTKKLGGPT*QWGFPTLEWVQKNKKSRGAW*I*NTPVIAKTTKYNSKTQRVSEIPEKGNALEKKPLIYKK 831
            DYIGKKYVILFFYPL+  FVCPT+ITAFS+RY +FE LNT+ L G +    F  L WVQ ++KS G   +   P+I+  TK  SK+  V  IP++G AL    +I K+
Sbjct:   94 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEIL-GVSIDSVFSHLAWVQTDRKSGGLGDL-KYPLISDVTKSISKSFGVL-IPDQGIALRGLFIIDKE 198          

HSP 2 Score: 55.4546 bits (132), Expect = 7.771e-28
Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 2
Query:  206 PRSFSGLRNPLKSQVPRPVSLSRGSRSRKSFVVKAS-VEIPPLVGNTAPDFAAEAVFDQEFINV 394
            P S S  R P    +    S SR +R+  SFV +A  V+  PLVGN APDF AEAVFDQEFINV
Sbjct:   28 PHSLSLPRAPAARPLRLSASSSRSARA-SSFVARAGGVDDAPLVGNKAPDFDAEAVFDQEFINV 90          
BLAST of EY680275 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-26
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  508 DYIGKKYVILFFYPLELPFVCPTKITAFSERYAKFENLNTKKLGGPT*QWGFPTLEWVQKNKKSRGAW*I*NTPVIAKTTKYNSKTQRVSEIPEKGNALEKKPLIYKK 831
            DYIGKKYVILFFYPL+  FVCPT+ITAFS+R+ +FE +NT+ LG       F  L WVQ  +KS G   +   P+++  TK  SK+  V  IP++G AL    +I K+
Sbjct:   44 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSV-DSVFSHLAWVQTERKSGGLGDL-KYPLVSDVTKSISKSFGVL-IPDQGIALRGLFIIDKE 148          

HSP 2 Score: 53.1434 bits (126), Expect = 2.409e-26
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 2
Query:  290 KSFVVKASVEIP-PLVGNTAPDFAAEAVFDQEFINV 394
            +SFV +A+ E   PLVGN APDFAAEAVFDQEFINV
Sbjct:    5 RSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINV 40          
BLAST of EY680275 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.409e-26
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  508 DYIGKKYVILFFYPLELPFVCPTKITAFSERYAKFENLNTKKLGGPT*QWGFPTLEWVQKNKKSRGAW*I*NTPVIAKTTKYNSKTQRVSEIPEKGNALEKKPLIYKK 831
            DYIGKKYVILFFYPL+  FVCPT+ITAFS+R+ +FE +NT+ LG       F  L WVQ  +KS G   +   P+++  TK  SK+  V  IP++G AL    +I K+
Sbjct:   44 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSV-DSVFSHLAWVQTERKSGGLGDL-KYPLVSDVTKSISKSFGVL-IPDQGIALRGLFIIDKE 148          

HSP 2 Score: 53.1434 bits (126), Expect = 2.409e-26
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 2
Query:  290 KSFVVKASVEIP-PLVGNTAPDFAAEAVFDQEFINV 394
            +SFV +A+ E   PLVGN APDFAAEAVFDQEFINV
Sbjct:    5 RSFVARAAAEYDLPLVGNKAPDFAAEAVFDQEFINV 40          
The following BLAST results are available for this feature:
BLAST of EY680275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BAS1A_ARATH2.077e-2850.932-Cys peroxiredoxin BAS1, chloroplastic OS=Arabido... [more]
BAS1_SPIOL2.077e-2850.932-Cys peroxiredoxin BAS1, chloroplastic OS=Spinaci... [more]
BAS1B_ARATH4.582e-2850.932-Cys peroxiredoxin BAS1-like, chloroplastic OS=Ar... [more]
BAS1_ORYSJ7.771e-2851.852-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza s... [more]
BAS1_WHEAT2.409e-2649.072-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
BAS1_HORVU2.409e-2649.072-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-C12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680275 ID=EY680275; Name=EY680275; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGGATGATTTTGAGCAACAGATAGCCACACTTTGTTTTGCC
CCGTTCGTTGACTCCAGCTGAACAATAATACAACAACAAAAACAATGGCT
TGCTCAGCTGCTTCTGCTGCTGCCACGGCAACAGCCGCTCTCATTTCCTC
TAACCCCAAGGCTTTCTCTTCTTCCTCAATCTCCCCTTCTCAAAACCTAA
CCATCCCCCGCTCCTTCTCCGGCCTCCGCAATCCCCTCAAGTCCCAGGTC
CCCCGCCCCGTTTCTCTTTCCCGCGGGTCCCGTTCTCGCAAGTCCTTCGT
TGTCAAAGCATCCGTTGAAATACCACCATTGGTGGGCAACACGGCACCTG
ATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCAATGTACATTAT
TTAAAAATAATAATAATAATAAAGAAATGAGAATGTTATACGAGTTGAAA
ATTTGAATTTTGTCCCTTTTTTTACTTGCTTTAGTGTTGGTTCAGGTCAA
GCTTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCGT
TGGAACTTCCATTTGTTTGCCCCACAAAAATCACTGCTTTCAGTGAACGA
TATGCTAAATTTGAAAACCTAAACACAAAAAAATTGGGTGGCCCAACCTG
ACAATGGGGTTTTCCAACTTTGGAATGGGTCCAAAAAAACAAAAAATCCA
GGGGGGCTTGGTAAATTTAAAATACCCCAGTAATTGCGAAAACCACCAAA
TACAATTCCAAAACCCAAAGGGTATCTGAAATCCCCGAAAAAGGAAATGC
ACTAGAAAAGAAACCCTTAATATATAAAAAAAAAAGAAATAACCCACTCG
CTACAACCAATAAAAAAACCCTCCGA
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