EY680273

Overview
NameEY680273
Unique NameEY680273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680273 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.615e-34
Identity = 78/260 (30.00%), Postives = 131/260 (50.38%), Query Frame = 1
Query:   13 SQLTQGKFNEIAQQVDINSQKGLVLDCPTRWNSTYFMLETALEYRNAFSALQDLDSEYSSALTETEWDWASSITGY--LQLFVEITNVFSGNKCPTANVYFPEICDVHIQLINWCKSPDEFLSSLALKMKSKFEKYWSKCSLALAMAAILDPRFKMKLVEYYYFQIYGSTALERIKEVSDGIKELFNAYAICSTMVDQXXXXXXXXXXXXXNDSRDKLRGFDKFLHETSQSQNATSN-LGKYLKEPIFPLNGESNIINWW 783
            S L   +  + A + D++  KG+  D  TRWNSTY ML  AL Y+ A   L+  D     A+     +W  ++T +  L+ F ++T + SG +  TAN+++   C++   +  WC      +  +A+ M  KFEKYW   ++ALA+A  LDPR+K  L+E+Y  + +G +    + +    I++L+  Y+ CS    +              ++ D    F  +LHE        SN L KY+ EP+   +G+ +I++WW
Sbjct:  434 SPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCVHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQFYSSCSPSAPKTKTTTNDSMDDTLMENEDD--EFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQFDILSWW 691          
BLAST of EY680273 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.572e-29
Identity = 77/284 (27.11%), Postives = 127/284 (44.72%), Query Frame = 1
Query:   13 SQLTQGKFNEIAQQVDINSQKGLVLDCPTRWNSTYFMLETALEYRNAFSALQDLDSE--------------------------YSSALTETEWDWASSITGYLQLFVEITNVFSGNKCPTANVYFPEICDVHIQLINWCKSPDEFLSSLALKMKSKFEKYWSKCSLALAMAAILDPRFKMKLVEYYYFQIYGSTALERIKEVSDGIKELFNAYAICSTMVDQXXXXXXXXXXXXXNDSRDKLRGFDKFLHETSQSQNATSN-LGKYLKEPIFPLNGESNIINWW 783
            S L   +  + A + D++  KG+  D  TRWNSTY ML  AL Y+ A   L+  D                                L      W  ++   L+ F ++T + SG +  TAN+++   C++   +  WC      +  +A+ M  KFEKYW   ++ALA+A  LDPR+K  L+E+Y  + +G +    + +    I++L+  Y+ CS    +              ++ D    F  +LHE        SN L KY+ EP+   +G+ +I++WW
Sbjct:  379 SPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYVCLNCCTCHHYKFSINQMSIIVGTMQFVLKPRSGRWHLTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCCHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLYQFYSSCSPSAPKTKTTTNDSMDDTLMENEDD--EFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQFDILSWW 660          
The following BLAST results are available for this feature:
BLAST of EY680273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRA1_MAIZE3.615e-3430.00Putative AC transposase OS=Zea mays PE=2 SV=2[more]
TRAC9_MAIZE1.572e-2927.11Putative AC9 transposase OS=Zea mays PE=4 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-C10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680273 ID=EY680273; Name=EY680273; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGTTCACAGTTAACACAAGGAAAGTTCAATGAGATTGCCCA
GCAAGTTGATATCAATAGTCAGAAGGGTCTAGTTCTTGATTGTCCAACTA
GATGGAACTCAACATATTTCATGCTAGAAACAGCCTTAGAGTACAGAAAT
GCATTTAGTGCCTTACAAGACCTTGACTCTGAGTACTCATCAGCTTTAAC
TGAAACAGAGTGGGATTGGGCAAGTTCCATTACTGGCTATTTGCAACTTT
TTGTTGAAATCACCAACGTCTTCTCTGGCAACAAATGTCCAACTGCAAAT
GTATATTTTCCTGAGATTTGTGACGTACATATCCAATTAATTAACTGGTG
TAAGAGCCCAGATGAATTTCTGAGCTCCTTGGCTTTAAAGATGAAAAGTA
AGTTTGAAAAATATTGGAGCAAATGCAGCTTGGCTTTGGCAATGGCAGCC
ATCTTAGATCCCCGATTCAAGATGAAGTTGGTGGAGTATTACTACTTTCA
GATTTATGGTAGTACTGCTCTTGAGCGAATCAAGGAAGTTTCTGATGGTA
TTAAGGAACTTTTCAATGCATATGCTATCTGCTCAACCATGGTGGATCAA
GGTTCTGCTTTGCCAGGAAGTAGCTTACCAAGCGCTAGTAATGATAGTAG
AGATAAATTAAGGGGCTTCGACAAATTCCTCCATGAGACTTCTCAGAGTC
AAAATGCAACTTCAAACTTGGGAAAGTATTTAAAGGAACCGATCTTTCCC
CTTAATGGTGAGTCCAACATAATAAATTGGTGGGAAAGTACCCCCACCGG
AGGACCCCATTTTGGCCAGGATGGCTCGGGGAGTTCCGGGAAACCCCCTG
GGTCACTGGTGTTCCCAAAAACCCCTTTTAACCCCGGGG
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