EY680272

Overview
NameEY680272
Unique NameEY680272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.006e-31
Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 3
Query:   12 MKLLSSFIIFIFPLVFPCVILSSK--SYQQLQLPGV-VGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRSL 521
            M+   S I  +  L F   +LS+K  S+Q+L +PG   GPE+ AFD  G+G Y GV+ G+ILK+     G+ +FA         +CDG+  TT    CGRP GI FN  T DLY+ADA  GL V+   GG A+++A S GG PF F + LD+DP TG+VYFT  S  F  R +
Sbjct:    2 MRSFVSLISLLLLLSFSSSVLSTKKSSFQKLPVPGNRTGPEAFAFDSTGKGFYTGVTGGKILKY-LPKKGYVDFAQITNSSKSSLCDGALGTTNVEKCGRPAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDV 173          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 6.105e-29
Identity = 68/148 (45.95%), Postives = 87/148 (58.78%), Query Frame = 3
Query:   66 VILSSKSYQQLQLPGV-VGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYF 506
            V     S+Q+L +P    GPE+ AFD  G+G Y GVS G+ILK+    +G+ +FA          CDG+  T L   CGRP GI FN  T DLY+ADA  GL V+ P GG A ++  S  G PF+F + LD+DP TG+VYFT  S  F
Sbjct:   20 VFSDDASFQKLPVPETRSGPEAFAFDSTGKGFYTGVSGGKILKY-LPETGYVDFAQITESSNSSWCDGTIGTALAGRCGRPAGIAFNEKTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRF 166          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: STSY_RAUSE (Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.964e-27
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3
Query:    3 TRPMKLLSSFIIFIFPLVFPCVILSSKSYQQLQLPGV-VGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRSL 521
            ++ M L + F++F+       + LSS   +++ +      P S  FD   +G Y  V DGR++K++  NSG+ +FA  +P+  +  C+ ST+    PLCGR   I +N     LYI D Y+ L VVG  GG A QLA+S  G+PF++   + +D  TGIVYFTD S  +  R +
Sbjct:    7 SQTMALFTVFLLFLSS----SLALSSPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 176          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: STSY_RAUMA (Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.964e-27
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3
Query:    3 TRPMKLLSSFIIFIFPLVFPCVILSSKSYQQLQLPGV-VGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRSL 521
            ++ M L + F++F+       + LSS   +++ +      P S  FD   +G Y  V DGR++K++  NSG+ +FA  +P+  +  C+ ST+    PLCGR   I +N     LYI D Y+ L VVG  GG A QLA+S  G+PF++   + +D  TGIVYFTD S  +  R +
Sbjct:    5 SQTMALFTVFLLFLSS----SLALSSPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 174          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: STSY_CATRO (Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.191e-24
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  120 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSS 497
            P +  FD   +G Y  V DGR++K++  NSG+T+FA  +P   +  C+ ST+    PLCGR   I ++     +YI D ++ L VVG  GG A QLA+S  G+PF++   + +D  TGIVYFTD S
Sbjct:   47 PNAFTFDSTDKGFYTSVQDGRVIKYEGPNSGFTDFAYASPFWNKAFCENSTDPEKRPLCGRTYDISYDYKNSQMYIVDGHYHLCVVGKEGGYATQLATSVQGVPFKWLYAVTVDQRTGIVYFTDVS 172          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.538e-16
Identity = 59/145 (40.69%), Postives = 77/145 (53.10%), Query Frame = 3
Query:   90 QQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSA---GGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRR 515
            Q+L    +VGPES+A    G+  Y G +DG+I+K +  +       T      +  CDGS     EP CGRPLGI+  P    L++ADAY GL  V P  G+   L S+    GG    F NDLD+  +   VYFTDSS  +QRR
Sbjct:   91 QRLFEDQLVGPESIANF--GDLIYTGTADGKIVKIEGKS------ITVIARLGKPPCDGSREQ--EPSCGRPLGIRVGP-NGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRR 224          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  111 VVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFR---FTNDLDIDPNTGIVYFTDSSIYFQRRSLSFL 530
            +VGPESLA    G+  Y G +DG+I+K +  N          P  +RE          E  CGRPLGI+  P    L++ADAY GL  V P  G+ + L S+   I  R   F NDLD+  +   VYFTDSS  +QRR    L
Sbjct:   98 LVGPESLANI--GDVFYTGTADGKIVKIEGRNIHVLATIGKPPCGSREH---------EHTCGRPLGIRVGP-NGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHL 228          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 56/144 (38.89%), Postives = 74/144 (51.39%), Query Frame = 3
Query:  111 VVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTL-EPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAG---GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRSLSFL 530
            +VGPES+     G+  + G +DG+ILK +       E  T A      I  G   T   EP CGRPLGI+  P    L++ADAY+GL  V P  G+ + L S+     G    F NDL +  +   +YFTDSS  +QRR   FL
Sbjct:   98 LVGPESIVNI--GDVLFTGTADGKILKIEDG-----EVQTVA-----RIGHGPCGTPEDEPTCGRPLGIRVGPNNT-LFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFL 228          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11
Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  111 VVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFR---FTNDLDIDPNTGIVYFTDSSIYFQRRSLSFL 530
            +VGPES+A    G+  + G +DGR++K +           + P + R+          EP+CGRPLGI+  P    L++ADAY GL  V P   + + L SS   I  +   F NDL +  +   +YFTDSS  +QRR    L
Sbjct:   99 LVGPESIAHI--GDVMFTGTADGRVVKLENGEIETIARFGSGPCKTRDD---------EPVCGRPLGIRAGP-NGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLL 229          
BLAST of EY680272 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 51/143 (35.66%), Postives = 71/143 (49.65%), Query Frame = 3
Query:  111 VVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFR---FTNDLDIDPNTGIVYFTDSSIYFQRRSLSFL 530
            +VGPES+A    G+  + G +DGR++K +           + P + R+          EP CGRPLGI+  P    L++ DAY GL  V P   + + L SS   I  R   F NDL +  +   +YFTDSS  +QRR    L
Sbjct:   98 LVGPESIANI--GDVMFTGTADGRVVKLENGEVETIARFGSGPCKTRDD---------EPACGRPLGIRAGP-NGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTVTRDGRKIYFTDSSSKWQRRDYLLL 228          
The following BLAST results are available for this feature:
BLAST of EY680272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
STS3_ARATH1.006e-3144.51Strictosidine synthase 3 OS=Arabidopsis thaliana G... [more]
STS1_ARATH6.105e-2945.95Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]
STSY_RAUSE1.964e-2736.78Strictosidine synthase OS=Rauvolfia serpentina GN=... [more]
STSY_RAUMA1.964e-2736.78Strictosidine synthase (Fragment) OS=Rauvolfia man... [more]
STSY_CATRO1.191e-2442.06Strictosidine synthase OS=Catharanthus roseus GN=S... [more]
APMAP_SALSA4.538e-1640.69Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_DANRE1.236e-1339.86Adipocyte plasma membrane-associated protein OS=Da... [more]
APMAP_CHICK4.696e-1338.89Adipocyte plasma membrane-associated protein OS=Ga... [more]
APMAP_HUMAN1.511e-1135.66Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_BOVIN9.792e-1135.66Adipocyte plasma membrane-associated protein OS=Bo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-C09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680272 ID=EY680272; Name=EY680272; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGATGAAACTACTTTCGTCTTTCATTATTTTCATTTTCCCC
CTGGTTTTTCCTTGTGTCATCTTATCTTCCAAAAGCTATCAGCAGCTTCA
GCTTCCCGGGGTGGTTGGTCCCGAAAGCCTTGCTTTCGACTGCAATGGGG
AAGGACCGTACGTCGGTGTTTCCGACGGTAGAATCCTTAAATGGAAAGCT
GCGAACTCTGGTTGGACTGAGTTTGCTACGACGGCCCCTCACAGGGCAAG
GGAAATATGTGATGGCTCAACGAATACAACTTTGGAACCGTTGTGTGGGA
GGCCATTAGGGATCAAATTCAATCCTGTAACTTGCGATCTATATATTGCA
GATGCGTACTTTGGGTTGATGGTGGTCGGTCCAAATGGTGGTCAGGCTCA
ACAACTTGCTTCTTCAGCCGGAGGAATCCCTTTTCGTTTCACAAACGACT
TGGACATCGATCCCAACACAGGAATAGTCTATTTTACCGACAGCAGCATT
TATTTCCAAAGAAGGTCGCTTTCCTTTCTTAATGGTTGTTGATGCTTTAT
CCTTAAATTATTTTCTACACTAATTTTTGTAGGGCTACAGGATCCCCTAT
CTTAATATGTAAGTTAAGATACCCTACTCACATTAATAATATATACTATT
TTTATAGATAGGAATTGCCCTAATTCTTTTTAGGTATAAATTTGCCTTCC
TTTCCAAAAAAGTGTCAAATTTCCCCCAAAATACCTTTTGGGGCTAAAGG
TTCCCATTACTTTGACCCCCAATTTTTATTATTTAGCCCAAAAAAAACTT
CCCTTTTAAAAAAAAAGGTAATTGGGGGGCGAAACCCATTTTTCGTTACA
CAAAGGTTTGGCCAAATTTTTACCCCAGAAAATTTTTTTCCAACATAAAA
AA
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