EY680270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 317.775 bits (813), Expect = 5.462e-86 Identity = 165/187 (88.24%), Postives = 171/187 (91.44%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 562 E+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK TLDNDEEKVGADIVKRAL YPLKLIAKNAGVNGSVVSEKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP +P GNPMDNSGYGY Sbjct: 415 EKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP-VPVGNPMDNSGYGY 600
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 313.538 bits (802), Expect = 1.030e-84 Identity = 165/186 (88.71%), Postives = 169/186 (90.86%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 559 E+EKL+ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK+TL NDEEKVGADIVKRAL YPLKLIAKNAGVNGSVVSEKVLSSDN KYGYNAATG YEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE A P GNPMDNSGYG Sbjct: 409 EKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESA-PVGNPMDNSGYG 593
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 2.375e-81 Identity = 155/187 (82.89%), Postives = 169/187 (90.37%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 562 E+EKLNERIAKL+GGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL++KVDAIK+TL+NDE+KVGA+IV+RALCYPLKLIAKNAGVNGSVV+EKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFL SD VVVEIKEPE A P NPMDNSG+GY Sbjct: 314 EKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPE-AAPLANPMDNSGFGY 499
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.210e-78 Identity = 152/172 (88.37%), Postives = 157/172 (91.28%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 517 E+EKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA CTLLRL+SKVDAIK LDNDEEKVGADIVKRAL YPLKLIAKNAGVNGSVVSEKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP Sbjct: 415 EKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP 586
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.108e-62 Identity = 129/180 (71.67%), Postives = 146/180 (81.11%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS-DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 532 E+EKLNERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA CTLLRLS KVD+IKETL N+E+K+GADI+KRAL YP+KLIA NAG NGSVV ++V+ + D YGYNAAT +EDLM AGIIDPTKVVRC LE+A SVAKTFL++D VV EI KE PA AG Sbjct: 76 EKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVVVTEIPEKEKAPAPAAG 255
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.268e-58 Identity = 121/188 (64.36%), Postives = 146/188 (77.66%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS-DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 562 EREKL ERIA+LSGGVA+IQVGAQTETELKEKKLRVEDALNAT+AA CTLLRLS KVD IK + + E+++GADI+KRALCYP+KLIA+NAGVNGSVV +V+ + D YGYNAAT ++E+LM GIIDP+KVVRC +E+A SVAKTFL++D VV E+KE E A NP+ G+ Sbjct: 245 EREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVVVTELKEIE-AGAKPNPVAPGAAGF 431
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 2.243e-47 Identity = 107/184 (58.15%), Postives = 132/184 (71.74%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 553 + EKL ERIAKL+GG+AVI+VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ D +EEK+GADIVKRAL PL+ IA NAGV GSV+ +V SD GYNAATG +EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE E + A PA M G Sbjct: 359 DSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKDSD-FNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKAAAPADAGMGGMG 540
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.930e-47 Identity = 103/184 (55.98%), Postives = 130/184 (70.65%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 553 +REKL ERIAKL+GGVAVI+VGA TETELK +KLR+EDALNAT+AA TLL L+S + +++ +L +EK+G +IV RAL PL+ IA NAG GSVV EK+ D +GYNA TG YEDL+A+GI+DP KVVR L+ A+SVA L ++ +VV+ EPEPAMPAG M G Sbjct: 360 DREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGVVPGGGTTLLHLASALTSLQASLTVADEKLGVEIVARALEAPLRQIADNAGAEGSVVVEKLRDKD-FNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVLVVDQPEPEPAMPAGGDMGGMG 542
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.827e-47 Identity = 102/175 (58.29%), Postives = 129/175 (73.71%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 526 ++EKL ERIAKL+GGVAVI+VGA TETELK++KLR+EDALNATKAA TL+ LS+KV+ +K +L+N+EEK+GADIV+RAL PL IA N+GV GSV+ EKV S+D GYN TG YEDL+AAGI+DP VVR L++A S+A L ++ VVVE E + A P Sbjct: 359 DKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTD-FSVGYNVITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVEKPEKKGAAP 532
BLAST of EY680270 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.998e-47 Identity = 106/184 (57.61%), Postives = 131/184 (71.20%), Query Frame = 2 Query: 2 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 553 + EKL ERIAKL+GG+AVI+VGA TETELK++KLR+EDALNATKAA TL+ L+SKVD IK+ D +EEK+GADIVKRAL PL+ IA NAG GSV+ +V SD GYNAATG +EDL+AAGIIDP KVVR L++A+S+A L ++ +VVE E + A PA M G Sbjct: 359 DSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKDSD-FNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKSAAPADAGMGGMG 540 The following BLAST results are available for this feature:
BLAST of EY680270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680270 ID=EY680270; Name=EY680270; organism=Citrus sinensis; type=EST; length=904bpback to top |