EY680269

Overview
NameEY680269
Unique NameEY680269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680269 vs. ExPASy Swiss-Prot
Match: Y1814_ARATH (Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.382e-50
Identity = 95/174 (54.60%), Postives = 117/174 (67.24%), Query Frame = 1
Query:  184 FVAKIRASSTAFVETKPSEPSFVE------NEASTSKNVLACPICYKPLTWIGDXXXXXXXXXXXXX-QCNTCKKTYSGVGTHFDMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVV 684
            FV++   +S+A V  + +  S V+      ++    K +LACPICY  L WI                QCNTCK++YSG  TH D+  ASGSK Y E M  +TE FR P +SF+YERGWRQNF+WGGFPGPEKEFE+ K YLKPVLGGNIIDASCGSG+FSR+F +S LFSLV+
Sbjct:   37 FVSRSAHASSASVSVETNSNSNVDFVIEKKDKNRGEKKILACPICYNSLAWISQPNGLIESAASGIQVQCNTCKRSYSGNETHLDLAVASGSKRYSEPMPLSTELFRTPLVSFLYERGWRQNFIWGGFPGPEKEFEMAKAYLKPVLGGNIIDASCGSGMFSRLFTRSDLFSLVI 210          

HSP 2 Score: 28.8758 bits (63), Expect = 1.382e-50
Identity = 14/47 (29.79%), Postives = 24/47 (51.06%), Query Frame = 3
Query:  669 VFSCCWSWTISKNWLKHCYEFGHQE*NFPKRKFFCWSKLKSPKFPLL 809
            +FS   +   S+N L+ CYE  ++E NFP ++     +    + P L
Sbjct:  205 LFSLVIALDYSENMLRQCYELLNKEENFPNKEKLVLVRADIARLPFL 251          
BLAST of EY680269 vs. ExPASy Swiss-Prot
Match: Y2104_ARATH (Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana GN=At2g41040 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.272e-30
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  280 VLACPICYKPLTWIGDXXXXXXXXXXXXXQCNTCKKTYSGVGTHFDMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVV 684
            V ACP+CY+PL   G              +C  C KTYS    + D+T  +   DY E+    TE FR P +SF+YERGWRQ F   GFPGP++EF + + Y K   GG ++D SCGSGLFSR FA+SG +S V+
Sbjct:   78 VFACPVCYEPLMRKGPSGINLQAIYRSGFKCGQCNKTYSSKDEYLDLTVTADLDDYNEVKPITTELFRSPLVSFLYERGWRQAFKRSGFPGPDEEFRMAEEYFKEAEGGLLVDVSCGSGLFSRKFAQSGKYSGVI 212          
The following BLAST results are available for this feature:
BLAST of EY680269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1814_ARATH1.382e-5054.60Uncharacterized methyltransferase At1g78140, chlor... [more]
Y2104_ARATH3.272e-3045.93Uncharacterized methyltransferase At2g41040, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-C05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680269 ID=EY680269; Name=EY680269; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGTAC
AAAGAGAGTTACTTTTATCATGGCGACTATCGTTAGCAGCAGCAGCTTCT
TCTCGGTGTCTCTACCGGGTCGACTCGGTAACTCGCGACGGTGTTCTGTC
AAACCCAATCCTTCGCCGATCTTTATACGCAAGTTTGTTGCCAAAATTCG
GGCTTCTTCAACAGCCTTTGTCGAAACCAAACCATCGGAGCCGAGTTTTG
TTGAAAATGAAGCAAGTACAAGCAAGAACGTGTTAGCTTGTCCCATCTGT
TATAAACCTCTAACGTGGATTGGTGATTCATCCTTGTCTATAGAATCTGC
AGCTGGGTCTAGTTTGCAATGTAACACTTGTAAAAAGACTTACAGTGGCG
TGGGAACTCATTTTGATATGACTGCGGCTAGTGGGTCAAAAGATTATGGT
GAATTGATGAGTCCTGCCACTGAATTTTTCAGGATGCCATTCATGTCATT
TATCTATGAGAGGGGCTGGCGTCAAAACTTTGTATGGGGTGGTTTTCCAG
GCCCAGAGAAGGAGTTTGAATTGATGAAGGGTTATCTAAAGCCTGTTTTA
GGTGGAAACATCATTGATGCTAGCTGTGGTAGTGGGCTGTTTTCACGAAT
TTTTGCTAAAAGTGGATTGTTTTCTCTTGTTGTTGGTCCTGGACTATTTC
GAAAAACTGGCTGAAACATTGTTATGAATTTGGTCACCAGGAATAAAACT
TTCCCAAAAGAAAATTTTTTTGTTGGTCAAAACTGAAATCTCCAAAATTT
CCTTTGCTTCCAGTTTTCAATTGGAGGCAATGGATGGCCCGGGGGCCCCA
AAAAACGTGGTGGTGCTTCCCCCCTCCAAAAGGGGGGTAACCTAAAAAAA
AATCCCAA
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