EY680261

Overview
NameEY680261
Unique NameEY680261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680261 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.188e-16
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:   73 LFLQTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNG 216
            ++ +TGALLLDGNTLNYFGKNIPINLV AV+AE+VL+GGAEYYRITNG
Sbjct:  146 VWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNG 193
The following BLAST results are available for this feature:
BLAST of EY680261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CB26_ARATH1.188e-1683.33Chlorophyll a-b binding protein CP26, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-B09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680261 ID=EY680261; Name=EY680261; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGTGCATTTTTCCAGATCGTTGCTCCTTTATGTCGTGTATT
TGCTTATGGTTTTGTTAATGTCCTGTTTTTGCAGACTGGAGCTCTACTTC
TTGATGGAAACACATTGAACTACTTCGGAAAGAACATCCCAATCAACCTT
GTTTTTGCTGTCATTGCTGAGATTGTTCTTGTAGGTGGTGCTGAATATTA
TAGAATCACCAACGGTTTGGTAATTGTCTTTGTCCTGCTTCTCATTAACA
TCACTTACACATTACTTACGTGGAAAATTAGTTTACCGCATTACCATTAC
TAGTCAAAAGCATATTCTAAAGTTAAAAGTGTAGCGAATTTGATAATTAT
AGTCATCATATATCATTTAGTTAAGCAAACACAAATAGTCAGTTAGTTGC
GTGCAAGGACTACATTCAATCTGCTTCCTTTCAAGCAAAGTGCAAAGTTC
AAATTCAATTAAACGTTAAAAAATTACAAAAAACTTTAGAGGTGAAATTT
CAGAGTCTTTGAAAAGCTTGGGGATGAGTTTTGAGTTCCATTCGATATGT
TCTGGTAGATACATGCATGCATGGTTACCGAAACAAAAAAACTCAAACTC
TGTGCAATTTCCATCGTAGGATTTGGAGGACAAGCTTCCACCAGGTGGGT
CCTTTTGACCCCCTGGGATTAACAAAGGATCCTGAACAATTTGGCATGGC
TAAAAGTGAAAGGAGATCAAAAATGGGAAAACTTTGCAATGGTTTGCCCA
TGCTGGGTTTTCTTTCCCCCAAGCCTAAATGCCCAGGGGTGAAGGGCCCA
TTTTGAAAAACCTTTGCAAAAACTCTCCAGGGAATCCTTTTGCCCCACCA
ACTTGGTTTTACCCGGGATTTCCCCGAGAAAACCCCAAAAAAAAAAGC
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