EY680259

Overview
NameEY680259
Unique NameEY680259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.456e-49
Identity = 81/157 (51.59%), Postives = 101/157 (64.33%), Query Frame = 2
Query:  176 KFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFS 646
            +F QQ+L ACKP+LT                     +L AS + +EI+DRYD  CIP  Y  + L YI +S   K CTR LK  K MK+P++IYYQLDN+YQNHRRYVKSR+D+QL        T +C PE +SNGL IVPCGLIAWS+FND++ FS
Sbjct:   28 QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTFTFS 184          

HSP 2 Score: 49.2914 bits (116), Expect = 4.456e-49
Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 3
Query:  669 VSKKNITWENDKKKKSGQKVYPKNFRNGILIGRGKNLISTIPFEQKKGFL 818
            VS+ NI W++D++ K G+ VYP NF+NG LIG G  L   IP   ++ F+
Sbjct:  192 VSRNNIAWKSDREHKFGKNVYPINFQNGTLIG-GAKLDPKIPLSDQEDFI 240          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.132e-48
Identity = 101/198 (51.01%), Postives = 123/198 (62.12%), Query Frame = 2
Query:  155 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKK*DGSSQQEKHNLGK*QKEKIRSKGLPKKFQK 748
            +K+P+YS+FTQQEL ACKPILT                      LFAS+ VVEIVDRYD  CIP +  ++M+AYIQ  + +K C R++  TK MK PVY+YYQL+NFYQNHRRYVKSRND QL S K E D K CAPE    G  IVPCGL+AWSLFND+Y FS         ++  +    ++ K      PK FQK
Sbjct:   25 SKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDTDCIPTSSRNNMVAYIQG-EGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQK 221          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.301e-48
Identity = 102/200 (51.00%), Postives = 123/200 (61.50%), Query Frame = 2
Query:  155 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKK*DGSSQQEKHNLGK*QKEKIRSKGLPKKFQKWN 754
            +K+P+YSKFTQQEL ACKPILT                     SLFAS++VVEIVDRYD  CIP     + +AYIQ  D +K C R LK TK MK P+Y+YYQL+NFYQNHRRYVKSR+D QL S K+E+    C PE    G  IVPCGLIAWSLFND+Y  S      +  ++       ++ K  +K  PK FQK N
Sbjct:   25 SKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDTECIPAPARTNKVAYIQG-DGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGN 223          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.755e-47
Identity = 105/201 (52.24%), Postives = 125/201 (62.19%), Query Frame = 2
Query:  155 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKK*DGSSQQEKHNLGK*QKE-KIRSKGLPKKFQKWN 754
            +K+P+YSKFTQQEL ACKPILT                     SLFAS++VVEIVDRYD  CIP +   + +AYIQ +  NK+CTR+L   K MK P+Y+YYQL+NFYQNHRRYVKSR+D QL S K E+    C PE    G  IVPCGLIAWSLFND+Y  S +   G +  +K    K  KE K      PK FQK N
Sbjct:   26 SKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDSACIPLSDRANKVAYIQGTG-NKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLS-RNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGN 224          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.286e-41
Identity = 94/209 (44.98%), Postives = 118/209 (56.46%), Query Frame = 2
Query:  173 SKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENV-----------------VEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKK*DGSSQQEKHNLGK*QKEKIRSKGLPKKFQK 748
            S+FTQQEL ACKPILT                      LFAS+ V                 +EIVDRYD  CIP +  D+ + YIQ  + +K C R++  TK MK+PVY+YYQL+N+YQNHRRYVKSR D QL S K E +TK+CAPE T  G  IVPCGL+AWSLFND+Y F+         ++  +    ++ K      PK FQK
Sbjct:   17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVCFKSFLTFLSYNYIYFVIEIVDRYDTDCIPLSSRDNKVRYIQGLE-DKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSPKDEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKFGKNVFPKNFQK 224          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: CC50A_CHICK (Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.302e-17
Identity = 59/163 (36.20%), Postives = 76/163 (46.63%), Query Frame = 2
Query:  152 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHE--DDTKNCAPEATSNGLSIVPCGLIAWSLFNDS 634
            KT+KP  + F QQ L A +PILT                         S N+ E    Y  G  P +  +  L    +S    TCT +       +S V++YY L NFYQNHRRYVKSR+D QL        + +K C P  T+    I PCG IA S+FND+
Sbjct:   33 KTRKPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDYT-GVEPSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDNSSLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDT 194          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: CC50A_PONAB (Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.814e-15
Identity = 58/163 (35.58%), Postives = 76/163 (46.63%), Query Frame = 2
Query:  152 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQL--WSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDS 634
            KT++P  + F QQ L A +PILT                         S N+ EI   Y  G  P +  +  L+      T   CT +    K  +  V++YY L NFYQNHRRYVKSR+D QL   S    + +K C P   +    I PCG IA S+FND+
Sbjct:   24 KTRRPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYT-GTEPSSPCNKCLS---PDVTPCICTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDT 182          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: CC50A_MOUSE (Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.814e-15
Identity = 56/163 (34.36%), Postives = 77/163 (47.24%), Query Frame = 2
Query:  152 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHE--DDTKNCAPEATSNGLSIVPCGLIAWSLFNDS 634
            KT++P  + F QQ L A +PILT                         S N+ EI   Y  G  P +  +  L+    + T+  CT +    +  +  V++YY L NFYQNHRRYVKSR+D QL        + +K C P   +    I PCG IA S+FND+
Sbjct:   24 KTRRPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYT-GTEPSSPCNKCLS---PNVTSCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNEDRPIAPCGAIANSMFNDT 182          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: CC50A_HUMAN (Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 58/163 (35.58%), Postives = 76/163 (46.63%), Query Frame = 2
Query:  152 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQL--WSKKHEDDTKNCAPEATSNGLSIVPCGLIAWSLFNDS 634
            KT++P  + F QQ L A +PILT                         S N+ EI   Y  G  P +  +  L+      T   CT +    K  +  V++YY L NFYQNHRRYVKSR+D QL   S    + +K C P   +    I PCG IA S+FND+
Sbjct:   24 KTRRPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYT-GTEPSSPCNKCLS---PDVTPCFCTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDT 182          
BLAST of EY680259 vs. ExPASy Swiss-Prot
Match: CC50B_MOUSE (Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.930e-14
Identity = 54/166 (32.53%), Postives = 75/166 (45.18%), Query Frame = 2
Query:  161 KPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNK----TCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQL--WSKKHEDDTKNCAP-EATSNGLSIVPCGLIAWSLFNDSY 637
            +P  + FTQQ L A +P+L+                       ++S  + E+   Y      P   D  +   +           C+ S    +L   PVY+YY+L NFYQN+RRY  SR+D QL   +         CAP +  S+GL I PCG IA SLFNDS+
Sbjct:   12 QPDNTAFTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGIKELEYDYTGN---PGTGDCSVCAAKGQGRAPPPGCACSWSFTLPELFPGPVYLYYELSNFYQNNRRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSF 174          
The following BLAST results are available for this feature:
BLAST of EY680259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ALIS2_ARATH4.456e-4951.59Putative ALA-interacting subunit 2 OS=Arabidopsis ... [more]
ALIS5_ARATH1.132e-4851.01ALA-interacting subunit 5 OS=Arabidopsis thaliana ... [more]
ALIS3_ARATH4.301e-4851.00ALA-interacting subunit 3 OS=Arabidopsis thaliana ... [more]
ALIS1_ARATH4.755e-4752.24ALA-interacting subunit 1 OS=Arabidopsis thaliana ... [more]
ALIS4_ARATH2.286e-4144.98Putative ALA-interacting subunit 4 OS=Arabidopsis ... [more]
CC50A_CHICK2.302e-1736.20Cell cycle control protein 50A OS=Gallus gallus GN... [more]
CC50A_PONAB2.814e-1535.58Cell cycle control protein 50A OS=Pongo abelii GN=... [more]
CC50A_MOUSE2.814e-1534.36Cell cycle control protein 50A OS=Mus musculus GN=... [more]
CC50A_HUMAN3.675e-1535.58Cell cycle control protein 50A OS=Homo sapiens GN=... [more]
CC50B_MOUSE6.930e-1432.53Cell cycle control protein 50B OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-B06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680259 ID=EY680259; Name=EY680259; organism=Citrus sinensis; type=EST; length=878bp
CTTTTTCTTAAAACAAAACAAATAGATAATGTTAATGTAAATAACAATGA
ACGGATAGTAAAATATCAAGAAAAGGGACTCCTAATTCACAAATTTAATT
TTGGCTGAGATGAAGGGAAGAAGGAGCTCATCAGATTCATCATCTTCTTC
CAAAACCAAGAAACCCCAATATTCTAAGTTTACACAGCAAGAGCTTTCGG
CTTGTAAACCGATTCTAACACCAGGATATGTCATTGGAATATTTATTATT
GTCGGCGTCATCTTCATCCCAGTTGGAATTATTTCATTGTTTGCATCAGA
GAATGTGGTAGAAATTGTGGACCGCTATGATGAAGGTTGCATTCCTCCTA
ACTATAGCGATGATATGCTTGCATATATCCAAAACAGTGATACTAACAAG
ACCTGTACCAGGAGTTTGAAGGCCACAAAGCTAATGAAAAGTCCTGTTTA
TATCTATTATCAGCTTGATAACTTCTATCAGAACCACCGTCGATATGTTA
AAAGCCGAAATGACAAGCAGTTGTGGAGCAAGAAACATGAGGATGACACA
AAAAACTGTGCTCCCGAAGCCACATCTAATGGACTCTCAATTGTTCCTTG
TGGTCTCATCGCATGGAGTTTGTTCAATGATTCATATGGATTTTCAATAA
AAAAATAAGATGGGTCAAGTCAGCAAGAAAAACATAACTTGGGAAAATGA
CAAAAAGAAAAAATCCGGTCAAAAGGTTTACCCAAAAAATTTCAGAAATG
GAATTTTAATTGGGAGGGGGAAAAATTTAATTTCCACCATACCTTTTGAA
CAAAAAAAAGGATTTTTAAAATAGGGATGCGCCCATGGCCCCCCTGGCCA
ACTTTTTTAGGAAAATGGGTAGGAAAAA
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