EY680249

Overview
NameEY680249
Unique NameEY680249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.887e-42
Identity = 87/113 (76.99%), Postives = 94/113 (83.19%), Query Frame = 2
Query:  176 EITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMV---WLPSFFE 505
            EIT+V EY+AIAK+KLPKMV+DYYASGAEDQWTLQENRNAF+RILFRPRILIDVSKIDM TTVLGFKISMPIM+APTAMQKMAHP+GEY         GTIM    W  S  E
Sbjct:    2 EITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVE 114          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.433e-41
Identity = 87/113 (76.99%), Postives = 92/113 (81.42%), Query Frame = 2
Query:  176 EITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMV---WLPSFFE 505
            EIT+V EYEAIAK+KLPKMV+DYYASGAEDQWTL ENRNAFSRILFRPRILIDV+ IDM TT+LGFKISMPIMIAPTAMQKMAHPEGEY         GTIM    W  S  E
Sbjct:    2 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVE 114          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41
Identity = 85/113 (75.22%), Postives = 92/113 (81.42%), Query Frame = 2
Query:  176 EITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMV---WLPSFFE 505
            EIT+V EY+AIAK KLPKMV+DYYASGAEDQWTLQENRNAF+RILFRPRILIDV+KIDM TTVLGFKISMPIM+APTA QKMAHP+GEY         GTIM    W  S  E
Sbjct:    2 EITNVTEYDAIAKAKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVNKIDMATTVLGFKISMPIMVAPTAFQKMAHPDGEYATARAASAAGTIMTLSSWATSSVE 114          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.068e-20
Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 2
Query:  140 NLSRKQSTDKMGEITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIM 481
            N    + T+++     V E    AK  LPKM +DYYASG+ DQ TL EN NAFSRI   PR L+DVSK++  T + G  IS PI+IAP AMQ+MA   GE           TIM
Sbjct:   18 NQFSNKKTNRLDSFVSVSELHEEAKRLLPKMAYDYYASGSNDQITLAENENAFSRIKLVPRSLVDVSKVNTKTRIFGRDISTPILIAPWAMQRMASQRGELDTVEASKEFNTIM 131          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 2
Query:  188 VMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMV---WLPSFFE 505
            + +YE  AK  LPK ++DYY SGA D+ TL +N  AFSR    PR+L +V++ D++T+VLG ++SMPI +  TAMQ+MAH +GE          GT M+   W  S  E
Sbjct:    8 INDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIE 116          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.884e-17
Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  143 LSRKQSTDKMGEITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGE 439
            L R +    + ++ ++ ++E IA++ LP     YY S A+D+ TL+EN NA+ RI F P+ILIDV  +D++T   G K S P  I+ TA+ K+ HPEGE
Sbjct:  175 LERIERKPPLSQMINLHDFETIARQILPPPALAYYCSAADDEVTLRENHNAYHRIFFNPKILIDVKDVDISTEFFGEKTSAPFYISATALAKLGHPEGE 273          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17
Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 2
Query:  188 VMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMV---WLPSFFE 505
            + +YE   +  L K V+DYY SGA DQ TL +N  AFSR    PR+L +V+ ID++T+VLG ++SMPI +  TAMQ MAH +GE          GT M+   W  S  E
Sbjct:    8 ISDYEQHVRSVLQKSVYDYYRSGANDQETLADNIQAFSRWKLYPRMLRNVADIDLSTSVLGQRVSMPICVGATAMQCMAHVDGELATVRACQTMGTGMMLSSWATSSIE 116          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.132e-15
Identity = 37/91 (40.66%), Postives = 63/91 (69.23%), Query Frame = 2
Query:  170 MGEITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHP-EGE 439
            +  I ++ ++E +A + L K  + YY+SGA D+ T +EN NA+ RI F+P+IL+DV K+D++T +LG  + +P  ++ TA+ K+ +P EGE
Sbjct:  199 LDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGE 289          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.950e-14
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 2
Query:  179 ITDVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGE 439
            +TD  E+   A+E L K  +D+   GA+D  T  EN  AF +I  RPR L DVSK+DM TT+ G +IS PI IAPT   ++A P+GE
Sbjct:    6 LTDFREH---AREHLSKSTWDFIEGGADDCCTRDENMAAFKKIRLRPRYLKDVSKVDMRTTIQGAEISAPICIAPTGFHRLAWPDGE 89          
BLAST of EY680249 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.156e-13
Identity = 33/85 (38.82%), Postives = 57/85 (67.06%), Query Frame = 2
Query:  185 DVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGE 439
            +V +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +   VLG + SMP++I PT +     P+G+
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGD 91          
The following BLAST results are available for this feature:
BLAST of EY680249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
GOX2_ARATH2.887e-4276.99Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX_SPIOL1.433e-4176.99Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
GOX1_ARATH9.287e-4175.22Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
HAOX_DICDI1.068e-2047.37Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX1_HUMAN6.477e-1844.95Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
CYB2_HANAN1.884e-1742.42Cytochrome b2, mitochondrial OS=Hansenula anomala ... [more]
HAOX1_MOUSE9.352e-1744.95Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
CYB2_YEAST5.132e-1540.66Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
HAOX2_BOVIN1.950e-1448.28Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
MDLB_PSEPU2.156e-1338.82(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-A07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680249 ID=EY680249; Name=EY680249; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGATTTTATTTTCTCTTTGCTTTCTATTTCTTACATCTCCC
TCTATAACTCAGTCTTTGTTCATCATCGTCTTCTCTCTACTGGTTTCTCT
GAATGCACTTTGCTGCACTGTCTTTGTAAACCTTAGATTAATTTAAGTAG
AAAACAGTCAACTGACAAGATGGGAGAGATCACAGATGTGATGGAATATG
AGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTGTTTGATTACTATGCT
TCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAACAGGAATGCTTTCTC
AAGAATCCTGTTTCGACCTCGCATTCTGATTGATGTAAGCAAAATAGACA
TGAATACCACTGTCTTGGGCTTCAAGATATCGATGCCAATCATGATTGCC
CCAACAGCCATGCAGAAGATGGCTCATCCTGAAGGGGAGTATGCTACAGC
TAGAGCTGCATCGGCTGCTGGAACGATTATGGTTTGGCTTCCCTCCTTTT
TTGAAGTTTAAATTAAAATATATACCCTTAAAACGACACTACAGGCTTTG
TTCGTACCATTTTCGTTTTCCCTTTTGGGGGGGTAAATTATCACCAATTT
TAGTTAAATCATGTGCGATCAGATGCCTTGGTCTTCAAGTTGGATACCTT
ATAGCAATTGCATAAATTGCCTCCATGGCTGATTTAGTTTCTTGTGATGC
CCCTAATCCAGGGAATAACCTTTCCTGGTTACCTTTTTGAAAAAAAATTA
ACCAGGCCAGGCTTGGAATAAAATTAAAATCCCAAAGCTTTTAATTAATG
GAGGGGAATGGTAAAAACCTAAAATTCCAATTTTAAAGCCCCAAAAATCC
CCCCAAAACCCCCCAAATTTCCCAAAAGGCGAAAATTTTTGGGGGGGGCG
TACCCCCTCCCTCCTCCCCCC
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