EY680248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.442e-48 Identity = 115/238 (48.32%), Postives = 137/238 (57.56%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPT-LLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHAN--IEMGKVVFLSRDGNKFQNWGDLP 781 KSG+ CPS A LVKP RTQM + GMKI CQATSIPADRVPDM KR+ +NLLLLGA+SLPT MLVPY +F PPG GS+ GGT AKDA+GND++A +WL TH PGDRTLT+GLK PT L+ +K + L L P Q P +G+VV+GPAPLSLALAH + +E GKVVF+ F+ GD P Sbjct: 18 KSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAPGDRTLTQGLK---------------------------GDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRT-GDAP 227
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.231e-47 Identity = 113/238 (47.48%), Postives = 144/238 (60.50%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANI-EMGKVVFLSRDGNKFQNWGDLP 781 +S + S VKP + QMV K +G++I CQA+SIPADRVPDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++AA+WL THGPGDRTLT+GLK ++LV E KT + + ++ + L V P + P +G+VV+GPAPLSLALAHA+I E GKV+F+ F+ GD P Sbjct: 16 RSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLK--------GDPTYLVVEND----------------KTLATYGINAVCTHLGCVV--PWNKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRT-GDAP 226
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 8.775e-44 Identity = 109/237 (45.99%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPARTQMVTKNPM--GMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANIEMGKVVFLSRDGNKFQNWGDLP 781 K+GMF PS A L K R ++ GMK+ CQATSIPAD VPDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+ GGT AKDA+GND+IAA+WL TH PGDRTLT+GLK ++LV E KT + ++ + L V P P +G+VV+GPAPLSLALAH +++ GKVVF+ F+ G+ P Sbjct: 18 KNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLK--------GDPTYLVVESD----------------KTLATFGINAVCTHLGCVV--PFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRT-GEAP 226
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.775e-44 Identity = 105/222 (47.30%), Postives = 129/222 (58.11%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANI-EMGKVVFL 739 K+G + PSRA L K AR K + K+ CQATSIPADRVPDMGKRQ MNLLLLGA+SLPT ML+PY FF PP G GGG AKDA+GNDI+AA WL THGPGDRTL +GL+ + + +RSL T ++ + + L + P + P +GKVV+GPAPLSLAL+H +I E GKVVF+ Sbjct: 19 KNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLKTHGPGDRTLAQGLR------GDPTYLVVENDRSL---------------ATYGINAVCTHLGCVV-----PWNKAENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFV 214
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.401e-41 Identity = 107/226 (47.35%), Postives = 135/226 (59.73%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANIEMGKVVFL 739 KSG+ S+ L+KP + + + +G MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT MLVPYATFFAPPG G GGT AKDA+GND+IA++WL TH PG+RTLT+GLK ++LV E T + + ++ + L V P P +G+VV+GPAPLSLALAHA+I+ GKVVF+ Sbjct: 16 KSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLK--------GDPTYLVVEND----------------GTLATYGINAVCTHLGCVV--PFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFV 212
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 5.323e-41 Identity = 106/226 (46.90%), Postives = 133/226 (58.85%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANIEMGKVVFL 739 KSG+ S+ LVKP + + + +G MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT MLVPY TFF PPG G GGT AKDA+GND+IA++WL TH PG+RTLT+GLK ++LV E T + + ++ + L V P P +G+VV+GPAPLSLALAHA+I+ GKVVF+ Sbjct: 16 KSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLK--------GDPTYLVVEND----------------GTLATYGINAVCTHLGCVV--PFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFV 212
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.023e-40 Identity = 111/240 (46.25%), Postives = 135/240 (56.25%), Query Frame = 2 Query: 77 KSGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANIEMGKVVFLSRDGNKFQNWGDLP 781 KSG+ S+A LVKP + + + MG MK KC A SIPAD RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG G GT AKDA GND++ +WL TH PG RTLT+GLK ++LV E T + + ++ + L V P P +GKVV+GPAPLSLALAHA+I+ GKVVF+ F+ GD P Sbjct: 18 KSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPADDRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSPGTRTLTQGLK--------GDPTYLVVEND----------------GTLATYGINAVCTHLGCVV--PWNTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRT-GDSP 227
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_ORYSJ (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.473e-38 Identity = 104/234 (44.44%), Postives = 131/234 (55.98%), Query Frame = 2 Query: 92 CPSRAFLVKPARTQMVTKNPM---GMKIKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANIEMGKVVFLSRDGNKFQNWGDLP 781 C SRA L KP + + + I CQA +SIPADRVPDMGKRQLMNLLLLGA+SLPT MLVPY FF P G G+AGGG AKD +GND++A +WL THGP DRTLT+GLK ++LV E KT + + ++ + L V P P +G+VV+GPAPLSLAL HA+++ GKV+F+ F+ GD P Sbjct: 16 CRSRASLGKPVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLK--------GDPTYLVVEAD----------------KTLATYGINAVCTHLGCVV--PWNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRT-GDNP 222
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRI_SYNR3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain RCC307) GN=petC PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.065e-37 Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 505 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSTENKFICPCHGSQYNNQGK 663 GDPTYL+V+ ++ YGINA+CTHLGCVVPWN+ NKF+CPCHGSQY+ GK Sbjct: 85 GDPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGANKFMCPCHGSQYDATGK 137 HSP 2 Score: 87.0409 bits (214), Expect = 1.065e-37 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 179 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLK 427 T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GND+ A+ WL H GDR+L +GLK Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGNDVTASGWLADHKEGDRSLVQGLK 84
BLAST of EY680248 vs. ExPASy Swiss-Prot
Match: UCRIA_WHEAT (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Triticum aestivum GN=petC PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.149e-35 Identity = 99/231 (42.86%), Postives = 123/231 (53.25%), Query Frame = 2 Query: 92 CPSRAF-LVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKLIL*THSLDAWSFLVRERSLYK*IHREIQPTLLWKKTKHLHHMESMLSALTLDVWCPGIQLRTSSSVPATDPNTITKGKVVKGPAPLSLALAHANIEMGKVVFLSRDGNKFQNWGDLP 781 C +RA L KP + + + I C A SI ADRVPDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GG AKD +GNDI+ DWL THGP DRTL +GLK ++LV E KT + + ++ + L V P P +GKVV+GPAPLSLAL HA+++ GKVVF+ F+ GD P Sbjct: 16 CRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTHGPNDRTLAQGLK--------GDPTYLVVESD----------------KTLATYGINAVCTHLGCVV--PWNAAENKFLCPCHGSQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRT-GDNP 219 The following BLAST results are available for this feature:
BLAST of EY680248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680248 ID=EY680248; Name=EY680248; organism=Citrus sinensis; type=EST; length=902bpback to top |