EY680246

Overview
NameEY680246
Unique NameEY680246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 2.362e-95
Identity = 162/198 (81.82%), Postives = 184/198 (92.93%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            + GV+VG+GMGGLT F+ GV+ LI+KG+++I+PFFIPY+ITNMGSALLAID GLMGPNYSISTACAT+NYCFYAAANHIRRGEAD+M+AGGTEAAIIP G+GGF+ACRALSQRN+ P+ ASRPWDK RDGFVMGEG G+LVMESLEHAMKRGA I+AEYLGGAV CDAHHMTDPR+DGLGVSSCI + LEDAGVSPEE
Sbjct:  160 KAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEE 357          

HSP 2 Score: 27.7202 bits (60), Expect = 2.362e-95
Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = 1
Query:  664 QVNYVNAQATSNLTRGFWLRLRHLKRALRETSENEKKMETNPWLGH 801
            +VNY+NA ATS L  G    +  +K+  + TS   K   T   +GH
Sbjct:  357 EVNYINAHATSTLA-GDLAEINAIKKVFKSTS-GIKINATKSMIGH 400          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.274e-93
Identity = 161/198 (81.31%), Postives = 180/198 (90.91%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            R GV+VG+GMGGL+ F+ GV+ LI+KGY+KI+PFFIPY+ITNMGSALLAID G MGPNYSISTACAT+NYCFYAAANHIRRGEADI+VAGGTEAAIIP G+GGF+ACRALSQRN+ P  A RPWDK+RDGFVMGEG G+LVMESLEHAMKR A IIAEYLGGAV CDA+HMTDPR+DGLGVSSCI  SL DAGV+PEE
Sbjct:  149 RAGVLVGTGMGGLSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCFYAAANHIRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGFVMGEGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPEE 346          

HSP 2 Score: 28.8758 bits (63), Expect = 1.274e-93
Identity = 18/46 (39.13%), Postives = 25/46 (54.35%), Query Frame = 1
Query:  664 QVNYVNAQATSNLTRGFWLRLRHLKRALRETSENEKKMETNPWLGH 801
            +VNY+NA ATS L  G    +R +K+  +  SE  K   T   +GH
Sbjct:  346 EVNYINAHATSTLA-GDLAEVRAIKQVFKNPSE-IKINSTKSMIGH 389          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3)

HSP 1 Score: 209.534 bits (532), Expect = 1.982e-53
Identity = 105/198 (53.03%), Postives = 138/198 (69.70%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            RIGV +GSG+GGL    TG +ALI+KG +K++PFF+P +I NM +  L+I  GL GPN +ISTAC T  +    AA  I  G+AD MVAGG E A  P G+ GF A +ALS RN+ P++ASRPWDKDRDGFV+G+G GI+V+E  EHA  RGA I AE +G  ++ DA+HMT P  DG G +  +  ++ DAGV+ E+
Sbjct:  100 RIGVAIGSGIGGLELIETGHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_COXBU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii GN=fabF PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.737e-52
Identity = 101/197 (51.27%), Postives = 133/197 (67.51%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 593
            R+GV +GSG+GG+       +AL+  G +KI+PFFIP +I NM S +++I   L GPN SI TAC T  +    AA  I   +AD M+AGGTE A  P G+GGF A RALS RN+ P++ASRPWDK RDGFV+GEG   +V+E LEHA KR A I AE +G  ++ DA+HMT P  +  G ++C+  SL DAG++PE
Sbjct:  100 RVGVAIGSGIGGMPWIEKNYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPE 296          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 100/198 (50.51%), Postives = 132/198 (66.67%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            RIG  +GSG+GGL        +L+  G +KI+PFF+P +I NM +  L I  GL GP+ SI+TAC +  +    AA  I  G+AD+MVAGG E A  P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +A +L DAG+   +
Sbjct:  100 RIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 297          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 100/198 (50.51%), Postives = 132/198 (66.67%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            RIG  +GSG+GGL        +L+  G +KI+PFF+P +I NM +  L I  GL GP+ SI+TAC +  +    AA  I  G+AD+MVAGG E A  P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +A +L DAG+   +
Sbjct:  100 RIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 297          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 100/198 (50.51%), Postives = 132/198 (66.67%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            RIG  +GSG+GGL        +L+  G +KI+PFF+P +I NM +  L I  GL GP+ SI+TAC +  +    AA  I  G+AD+MVAGG E A  P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +A +L DAG+   +
Sbjct:  100 RIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 297          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 100/198 (50.51%), Postives = 132/198 (66.67%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 596
            RIG  +GSG+GGL        +L+  G +KI+PFF+P +I NM +  L I  GL GP+ SI+TAC +  +    AA  I  G+AD+MVAGG E A  P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +A +L DAG+   +
Sbjct:  100 RIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 297          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 1.018e-49
Identity = 96/195 (49.23%), Postives = 132/195 (67.69%), Query Frame = 3
Query:    3 RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS 587
            R+GV +GSG+GGL     G  AL++KG +K++PFF+P +I NM +  L+I  GL GPN +ISTAC T  +    AA  I  G+A+ MVAGG E A  P G+ GF A +ALS RN+ P++ASRPWDK RDGFV+G+G G++V+E  EHA  RGA I AE +G  ++ DA+HMT P  DG G +  +  ++ DA ++
Sbjct:  100 RVGVAIGSGIGGLDLIEAGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANIT 294          
BLAST of EY680246 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.244e-47
Identity = 98/196 (50.00%), Postives = 125/196 (63.78%), Query Frame = 3
Query:    6 IGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 593
            IGV++G+G+GGL         L+ KG  + +PF IP  I NM S L AI+ G  GPN    TACA  +     A   ++ G A  M+ GGTEAAI P    GF + RALS RN+ P  ASRP+DKDRDGFVMGEG GIL++E LE A+ RGA I  E +G A+TCDA+H+T P  DG G +  IA +L+D+G+ PE
Sbjct:  104 IGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPE 299          
The following BLAST results are available for this feature:
BLAST of EY680246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
KASC1_ARATH2.362e-9581.823-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
KASC1_HORVU1.274e-9381.313-oxoacyl-[acyl-carrier-protein] synthase I, chlor... [more]
FABF_VIBCH1.982e-5353.033-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
FABF_COXBU3.737e-5251.273-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Cox... [more]
FABF_SHIFL4.569e-5050.513-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shi... [more]
FABF_ECOLI4.569e-5050.513-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECOL64.569e-5050.513-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECO574.569e-5050.513-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_VIBHA1.018e-4949.233-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
FABF_SYNY31.244e-4750.003-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-A04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680246 ID=EY680246; Name=EY680246; organism=Citrus sinensis; type=EST; length=877bp
CAAGAATTGGAGTTGTAGTGGGATCAGGCATGGGAGGCCTCACGTCTTTT
ACCACTGGAGTTGAAGCTCTTATTCAAAAGGGATATAAGAAGATAACTCC
ATTTTTCATACCGTATTCAATCACCAACATGGGTTCAGCATTGTTAGCCA
TAGACACCGGTTTGATGGGACCAAATTATTCTATTTCAACAGCTTGTGCA
ACTGCTAATTATTGCTTTTACGCTGCTGCAAATCACATCAGAAGAGGTGA
AGCAGATATCATGGTCGCTGGTGGGACTGAGGCTGCTATTATACCTACTG
GGGTTGGTGGGTTTATTGCTTGTCGAGCTCTGTCCCAAAGGAATGAATAC
CCCAAAAGAGCTTCGAGACCTTGGGACAAAGATCGCGATGGCTTTGTCAT
GGGAGAGGGCTGTGGCATACTGGTTATGGAGAGCTTGGAGCATGCAATGA
AAAGAGGAGCTAACATAATTGCCGAGTATCTGGGAGGTGCGGTAACCTGT
GATGCTCATCACATGACAGATCCAAGGTCAGATGGCCTCGGAGTTTCATC
TTGCATAGCCAAGAGTTTAGAAGATGCAGGAGTTTCCCCTGAAGAGGGTA
GATAAATCTTAAAAAAATTCATTTGAATGACCTCTAGATTAATGTAAAAC
TTCAATTTGGATACAGGTAAACTACGTGAATGCTCAGGCAACATCCAACT
TAACCAGGGGATTTTGGCTGAGGTTAAGGCATTTAAAAAGGGCCTTAAGG
GAAACTTCCGAAAATGAAAAAAAAATGGAAACTAATCCATGGTTGGGACA
TGGGGTTTGGGGGCACCGGGGGGAATGGGAACCTTAAAAAACCCAAAAAA
AGAAACCACCCTTGGGGGGGGTTGGCC
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