EY680202

Overview
NameEY680202
Unique NameEY680202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig33 contig Csv1_Contig33:44..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_ARATH (Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=At2g19940 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 9.087e-57
Identity = 110/126 (87.30%), Postives = 118/126 (93.65%), Query Frame = 3
Query:    9 RGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 386
            +GL+DVA SKVTVSFTPHLMPMIRGMQSTIYVEMAPGV  EDL QQLK SYE EEFVK+L++GVVPRTHNVRGSNYC M+VFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG+PE TGLL+Q
Sbjct:  272 QGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGYPETTGLLHQ 397          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_ORYSJ (Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0617900 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.608e-45
Identity = 92/126 (73.02%), Postives = 105/126 (83.33%), Query Frame = 3
Query:    9 RGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 386
            +GL++ A SKVT+SFTP+L+ M RGMQST++VEMAPGVT  DL Q LK +YE EEFVKLL    VP T +V GSNYC MNVF DRIPGRAIIISVIDNLVKGASGQA+QNLN+M+G PENTGL YQ
Sbjct:  286 QGLSEAAESKVTISFTPNLICMKRGMQSTMFVEMAPGVTANDLYQHLKSTYEGEEFVKLLNGSSVPHTRHVVGSNYCFMNVFEDRIPGRAIIISVIDNLVKGASGQAVQNLNLMMGLPENTGLQYQ 411          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_RHORT (N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=argC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.237e-29
Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 3
Query:    9 RGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +GL+      V V+FTPHLMPM RG+ STIY+    G     L Q L  +Y  E FV+++ +GV P T +VRGSN+ L+ V  DR+PGR I+  V DNLVKGASGQA+Q++N+MLGFPE  GL
Sbjct:  223 QGLSLAVGRPVAVTFTPHLMPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVLIGVHADRVPGRVIVTCVEDNLVKGASGQAIQDMNVMLGFPETLGL 345          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_STAS1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=argC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.979e-28
Identity = 64/122 (52.46%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            L+ +A  +V V+FTPHL+PM RG+ STIY+++    T EDL    K  YE + FV++   G  P+T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLN+M G+ ENTGLL
Sbjct:  216 LSLLAQQEVKVTFTPHLVPMTRGILSTIYIKLNHAFTNEDLHNLFKDYYEDKPFVRIRSLGQFPKTKEVYGSNYCDIGIYVDEENQTAILVSVIDNLVKGASGQAIQNLNLMYGWKENTGLL 337          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_GEOSM (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter sp. (strain M21) GN=argC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.863e-28
Identity = 62/121 (51.24%), Postives = 85/121 (70.25%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            L+ +A S + ++FTPHL+PM RG+ STIY + A  V   DL    +  Y+ E FV++L +GV+P T +VRGSN+C + +  D+  GR I+IS IDNLVKGASGQA+QN+N+M G PE  GL
Sbjct:  219 LSLLAGSPLNITFTPHLVPMDRGILSTIYSQTAGSVKAADLIALYEAFYDGEPFVRVLPEGVLPSTAHVRGSNFCDIGITVDQRTGRVIVISAIDNLVKGASGQAVQNMNLMCGLPETLGL 339          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_OLICO (N-acetyl-gamma-glutamyl-phosphate reductase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=argC PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.975e-27
Identity = 64/117 (54.70%), Postives = 77/117 (65.81%), Query Frame = 3
Query:   27 ASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            A   V V+FTPHL PM RG+ STIYV    G T  DL + L   YE + FV +L  G  P + +VRGSN   + V  DR PGRAII+S +DNL KGASGQA+QN+N+MLGF E  GL
Sbjct:  229 AGKDVLVTFTPHLTPMNRGIYSTIYVRGRRGKTARDLHETLSKQYEKDPFVYVLPFGKTPNSRHVRGSNMTFIGVAEDRKPGRAIIVSTLDNLTKGASGQAVQNMNVMLGFAETLGL 345          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_DESRM (N-acetyl-gamma-glutamyl-phosphate reductase OS=Desulfotomaculum reducens (strain MI-1) GN=argC PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.975e-27
Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +A + VTVSFTPHL PMIRG+ STIY  +   VT E+L    +  Y+ E FV++L  G+ P T  V GSN+C ++V  D    R I++S IDNL+KGA+GQA+QNLN+MLG PE+T L
Sbjct:  222 LAGNPVTVSFTPHLTPMIRGILSTIYASLINNVTTEELTAIYRQFYQGERFVRVLPAGMYPTTKGVAGSNHCDISVTVDVRTKRVIVLSAIDNLIKGAAGQAVQNLNVMLGLPEDTAL 339          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_GEOUR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter uraniireducens (strain Rf4) GN=argC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.368e-27
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            L+ +A  ++ +SFTPHL+PM RG+ STIY      V+  +L +  +  Y+ E FV++L +G  P T +VRGSN+C + +  D   GR +++S IDNL+KGASGQA+QN+NIM GFPEN GL
Sbjct:  219 LSLLAGKQLKISFTPHLVPMDRGILSTIYATPTGAVSSAELLELYRAYYQGEAFVRILPEGSFPSTSHVRGSNFCDIGLAVDNRTGRVVVVSAIDNLIKGASGQAVQNMNIMNGFPENLGL 339          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_GEOSF (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter sp. (strain FRC-32) GN=argC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            L+ +A  ++T++FTPHL+PM RG+ STIY E A  V++  L +  +  Y  E FV++L +   P T  VRGSN+C + +  D+  GR +I+S IDNL+KGASGQA+QN+NIM GFPEN GL
Sbjct:  219 LSLLAGKQLTITFTPHLVPMDRGILSTIYAEPAGEVSLAGLVELYRDFYHGEAFVRVLPENNFPSTAFVRGSNFCDIGLTVDKRTGRIVIVSAIDNLIKGASGQAIQNMNIMNGFPENLGL 339          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_GEOBB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=argC PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.503e-27
Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            L+ +A + + ++FTPHL+PM RG+ STIY +    V   DL    +  Y+ E FV++L +GV+P T +VRGSN+C + +  D+  GR I+IS IDNLVKGASGQA+QN+N+M G PE  GL
Sbjct:  219 LSLLAGNPLNITFTPHLVPMDRGILSTIYSQPTGSVKAADLIALYQAFYDGEPFVRVLPEGVLPSTAHVRGSNFCDIGITVDQRTGRVIVISAIDNLVKGASGQAVQNMNLMCGLPETLGL 339          
The following BLAST results are available for this feature:
BLAST of EY680202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ARGC_ARATH9.087e-5787.30Probable N-acetyl-gamma-glutamyl-phosphate reducta... [more]
ARGC_ORYSJ1.608e-4573.02Probable N-acetyl-gamma-glutamyl-phosphate reducta... [more]
ARGC_RHORT1.237e-2952.85N-acetyl-gamma-glutamyl-phosphate reductase OS=Rho... [more]
ARGC_STAS13.979e-2852.46N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_GEOSM8.863e-2851.24N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_OLICO1.975e-2754.70N-acetyl-gamma-glutamyl-phosphate reductase OS=Oli... [more]
ARGC_DESRM1.975e-2752.54N-acetyl-gamma-glutamyl-phosphate reductase OS=Des... [more]
ARGC_GEOUR3.368e-2748.76N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_GEOSF5.745e-2750.41N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_GEOBB7.503e-2749.59N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680202 ID=EY680202; Name=EY680202; organism=Citrus sinensis; type=EST; length=905bp
CCCGCGTCCGGGGACTGACTGATGTTGCAAGTTCAAAAGTAACAGTCAGT
TTCACTCCACACCTAATGCCAATGATCCGAGGCATGCAATCAACTATATA
CGTTGAAATGGCTCCAGGAGTGACAATCGAGGATTTATGCCAGCAATTAA
AAATCTCCTATGAGCATGAGGAATTTGTGAAGTTGTTGGAAAAGGGAGTT
GTCCCTCGGACTCACAATGTTCGAGGTTCTAATTACTGTTTGATGAATGT
CTTTCCTGATCGAATTCCTGGAAGAGCAATAATTATATCAGTTATTGATA
ATCTTGTGAAGGGAGCATCAGGTCAAGCTCTTCAAAATCTTAACATAATG
CTGGGATTTCCGGAAAATACTGGGCTTCTATATCAGCCCTTGTTTCCTTA
GTTTCTTTTCTTAATATGTTTAAAGAGTAAGCAGGCATTTTCAACACTAA
TTAACAAATCTCTCTTAGCCTACCCAAAACTCTCTTGAAAATTAGTATAT
TTCGTCTATCGACTATGGAGGCTGTTCAGGAACAGTTCAGGTTACTTTGG
GGGAATTTTGTTTTCAAAGCTCCGACACCCTTTTGAAGAGTTCCTCCATT
TCGTCGAATTGTCAGAAAAGAGTGGTGCTAGAAGCATGTAGAATAGTATA
ACAGGAGTCCATGTGTGTAATAATGAAAATTCACTTTACAGGGTTGAGGG
ATTTTTGAAAAATTGGTTTAAATTTTTGGGCTTGCAAGGGTGGGAACCAC
CTCCATACACCAAATAAAAAGTGCTTTTTAATTCAAAAAAAAAAAAAAAA
GGGGGGCCCGCTCCTAAAGGATACCAGCTTAAGTACCCGGGGGATGGCAA
AAGCCCTAACCCCTTCTAAAAGGGGCCCCCAAAATTTTAATATTCCCGGG
GGCCG
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