EY680178

Overview
NameEY680178
Unique NameEY680178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9273 contig Csv1_Contig9273:184..1064. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY680178 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.610e-58
Identity = 120/235 (51.06%), Postives = 150/235 (63.83%), Query Frame = 2 
Query:   20 WADLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEEDLCAGKSYVTYDDKLINSGNNMHTYHESINWTAQGXXXXXXXXXXXXXDVKLWLESANDALTYYPVLSWGSFATCGRRETMEDTHFLMPHMYNQKEIHMFGIFDGHRGSAAAEFSARALPGFLQI*VPLTGLPMPCWKAFIKNNVAVQNE 724
            + DLRAEAQAHTVLEM YTEQQLTAA+VS GLRP LA  E G P S+LSLIQRCWD +P  RPSF DI  EL ++ +H       + C   S  +  +K  N    +H Y E+++W  QG             D   W +  + +  Y P LSWGSFATCGRRETMEDTHF++PHM  +K++H FGIFDGHRGSAAAEFS RA+PGFL+     T       +AF++ ++A + E
Sbjct:  247 YTDLRAEAQAHTVLEMTYTEQQLTAAIVSQGLRPALALPESGAPPSLLSLIQRCWDSDPQQRPSFKDITEELKIIEKHIAV----NSC---SLASPANKSQNGNTEVHHYQEALSWLNQGELFAKGNKLDSTVDH--WSDIFDQSSKYCPTLSWGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREE 472
[Close]
BLAST of EY680178 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.988e-57
Identity = 114/235 (48.51%), Postives = 151/235 (64.26%), Query Frame = 2 
Query:   20 WADLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEEDLCAGKSYVTYDDKLINSGNNMHTYHESINWTAQGXXXXXXXXXXXXXDVKLWLESANDALTYYPVLSWGSFATCGRRETMEDTHFLMPHMYNQKEIHMFGIFDGHRGSAAAEFSARALPGFLQI*VPLTGLPMPCWKAFIKNNVAVQNE 724
            + D RAEAQAHTVLEMNYTEQQLT A+VS GLRP LA + L LP S+LSLIQ CW+ +P  RPS  ++ LEL+ + E  +  ++  L    S    D    +   N   Y +++NW +QG             DVKLW  S ++   Y PV+S GSFATCGRRE+MEDTHF++PHM N++ IH+F IFDGHRG+AAAEFSA+ LPG +Q  +  T       +AF++ ++A + E
Sbjct:  240 YTDRRAEAQAHTVLEMNYTEQQLTVAIVSSGLRPALAEIGLHLPKSLLSLIQNCWESDPSKRPSSDNVVLELESIWEQVRGKQQGHLLEKTSNSQSDTDGADIIKNSGDYRDTVNWFSQGECLSKKSSVSTVFDVKLWSSSTDEPSRYVPVISCGSFATCGRRESMEDTHFIIPHMCNEESIHLFAIFDGHRGAAAAEFSAQVLPGLVQS-LCSTSAGEALSQAFVRTDLAFRQE 473
The following BLAST results are available for this feature:
BLAST of EY680178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
P2C04_ORYSJ4.610e-5851.06Protein kinase and PP2C-like domain-containing pro... [more]
P2C31_ARATH2.988e-5748.51Protein kinase and PP2C-like domain-containing pro... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-C04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680178 ID=EY680178; Name=EY680178; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGCGGACGCGTGGGCTGACCTTCGTGCCGAGGCTCAGGCTC
ACACTGTCCTGGAGATGAACTATACTGAGCAGCAACTCACTGCAGCTGTG
GTTTCTGGTGGGCTTCGACCTATTCTTGCCAGTCTAGAGTTGGGTCTGCC
AGCATCTATTCTTTCATTGATACAGAGGTGTTGGGATGGAAATCCTCATA
ACAGGCCTTCTTTTTCTGATATAGCTTTGGAACTTGATCTAGTTTTGGAA
CATAGAAAAAGCTTGAAGGAAGAAGATCTGTGTGCTGGCAAATCTTATGT
TACTTATGATGATAAGCTCATAAATAGTGGCAACAATATGCATACCTATC
ACGAGAGTATTAACTGGACAGCCCAGGGAGAACATTCCTCCAAGAAGGCT
TCTCATGCGGCTGAATCCGATGTGAAACTTTGGCTTGAATCTGCAAATGA
TGCTTTGACTTATTATCCAGTACTTTCTTGGGGATCCTTTGCTACATGTG
GCAGAAGAGAGACTATGGAAGATACTCACTTCCTCATGCCTCATATGTAC
AATCAAAAGGAGATCCATATGTTTGGCATTTTTGATGGTCACAGAGGTTC
AGCAGCTGCTGAGTTTTCAGCTCGAGCTTTGCCAGGGTTTTTGCAAATTT
AGGTTCCACTAACAGGCCTACCGATGCCTTGCTGGAAAGCATTTATTAAA
AACAATGTTGCCGTTCAAAATGAAACTTGATTCTCTCCCTAAATCCAAAA
AAAGTGTTCAAAAAAAATGGGACCCCGGTTTGCCCGGTTATGGCGGCCCT
AATAATTTAGAACAAGGCTTTTTTGTTGCTAAGGCGGGGGATTGTTAGGG
AAATTCCCTGTTCAGGGGGGGGCCTCCCTT
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