EY680175

Overview
NameEY680175
Unique NameEY680175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11521 contig Csv1_Contig11521:321..1211. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY680175 vs. ExPASy Swiss-Prot
Match: NXN_MOUSE (Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPF-DETLHKKLRIRYRVDRIPSLIPLASDGTLI-EEDLIGLIEDYGADAYPFTRKRREEL 360
            ++FSA+WC PC++ T  LV+ Y  ++  G E E+IF+S D  E  F+++F  MPWLAVP+ DE    +L   Y +  IP+LI L   G +I  +  + ++ D     +P+  K   EL
Sbjct:  198 VYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLEL 315          

HSP 2 Score: 69.707 bits (169), Expect = 2.006e-11
Identity = 54/192 (28.12%), Postives = 83/192 (43.23%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGT-------------------ELEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKLRI--RYRVDRIPSLIPL-ASDGTLI-EEDLIGLIEDYGADAYPFTRKRREELKAIDDSKRQGGKLEQLLAIEGRDYVLSRDHRKITVSELAGKTIGLYFGAHWVP 519
            L+F  +   PC   +  L   Y  LR                        LE++F+S D D+  +++  + MPWLA+P+ E  H+KL++  +YRV  IPSLI L A+ G ++    L+ + +D     +P+  K   E+ A    +  G  LE                     S L G  +G+YF AHW P
Sbjct:   36 LYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEK-HRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLRNNGQSLES--------------------SSLEGSHVGVYFSAHWCP 206          

HSP 3 Score: 20.4014 bits (41), Expect = 2.006e-11
Identity = 6/6 (100.00%), Postives = 6/6 (100.00%), Query Frame = 2
Query:  515 CPPCRS 532
            CPPCRS
Sbjct:  205 CPPCRS 210          
BLAST of EY680175 vs. ExPASy Swiss-Prot
Match: NXN_BOVIN (Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPF-DETLHKKLRIRYRVDRIPSLIPLASDGTLI-EEDLIGLIEDYGADAYPFTRKRREEL 360
            ++FSA+WC PC++ T  LV+ Y  ++  G + E+IF+S D  E+ F+++F  MPWLAVP+ DE    +L   Y +  IP+LI L   G +I  +  + ++ D     +P+  K   EL
Sbjct:  198 VYFSAHWCPPCRSLTRVLVESYRKIKEAGQKFEIIFVSADRSEDSFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCRGFPWHPKPVLEL 315          

HSP 2 Score: 69.3218 bits (168), Expect = 2.604e-11
Identity = 53/192 (27.60%), Postives = 83/192 (43.23%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGT-------------------ELEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKLRI--RYRVDRIPSLIPL-ASDGTLI-EEDLIGLIEDYGADAYPFTRKRREELKAIDDSKRQGGKLEQLLAIEGRDYVLSRDHRKITVSELAGKTIGLYFGAHWVP 519
            L+F  +   PC   +  L   Y  LR                        LE++F+S D D+  +++  + MPWLA+P+ E  H+KL++  +YR+  IPSLI L A+ G ++    L+ + +D     +P+  K   E+ A    +  G  LE                     S L G  +G+YF AHW P
Sbjct:   36 LYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGPGAGASAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEK-HRKLKLWNKYRISNIPSLIFLDATSGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLRSNGQSLES--------------------SSLEGSHVGVYFSAHWCP 206          

HSP 3 Score: 20.4014 bits (41), Expect = 2.604e-11
Identity = 6/6 (100.00%), Postives = 6/6 (100.00%), Query Frame = 2
Query:  515 CPPCRS 532
            CPPCRS
Sbjct:  205 CPPCRS 210          
BLAST of EY680175 vs. ExPASy Swiss-Prot
Match: NXN_HUMAN (Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPF-DETLHKKLRIRYRVDRIPSLIPLASDGTLI-EEDLIGLIEDYGADAYPFTRKRREEL 360
            ++FSA+WC PC++ T  LV+ Y  ++  G   E+IF+S D  E  F+++F  MPWLAVP+ DE    +L   Y +  IP+LI L   G +I  +  + ++ D     +P+  K   EL
Sbjct:  198 VYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLEL 315          

HSP 2 Score: 69.3218 bits (168), Expect = 2.604e-11
Identity = 53/192 (27.60%), Postives = 83/192 (43.23%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGT-------------------ELEVIFISFDHDENGFEEHFKCMPWLAVPFDETLHKKLRI--RYRVDRIPSLIPL-ASDGTLI-EEDLIGLIEDYGADAYPFTRKRREELKAIDDSKRQGGKLEQLLAIEGRDYVLSRDHRKITVSELAGKTIGLYFGAHWVP 519
            L+F  +   PC   +  L   Y  LR                        LE++F+S D D+  +++  + MPWLA+P+ E  H+KL++  +YR+  IPSLI L A+ G ++    L+ + +D     +P+  K   E+ A    +  G  LE                     S L G  +G+YF AHW P
Sbjct:   36 LYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEK-HRKLKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLRNNGQSLES--------------------SSLEGSHVGVYFSAHWCP 206          

HSP 3 Score: 20.4014 bits (41), Expect = 2.604e-11
Identity = 6/6 (100.00%), Postives = 6/6 (100.00%), Query Frame = 2
Query:  515 CPPCRS 532
            CPPCRS
Sbjct:  205 CPPCRS 210          
BLAST of EY680175 vs. ExPASy Swiss-Prot
Match: NXN_DANRE (Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15
Identity = 39/110 (35.45%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPF-DETLHKKLRIRYRVDRIPSLIPLASDGTLI-EEDLIGLIEDYGADAYPF 336
            ++FSA+WC PC++ T  LV+ Y  ++  G + E++F+S D  E  F ++F  MPWLAVP+ DE    +L   Y +  IP+LI L ++G +I  +  + ++ D     +P+
Sbjct:  181 VYFSAHWCPPCRSLTRVLVESYRKVKETGQKFEIVFVSADRSEESFTQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPTLILLDTEGHMITRQGRVEILNDPDCGLFPW 290          
BLAST of EY680175 vs. ExPASy Swiss-Prot
Match: NXN_XENLA (Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 1
Query:   13 LFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPF-DETLHKKLRIRYRVDRIPSLIPLASDGTLI-EEDLIGLIEDYGADAYPFTRKRREELKAID 372
            ++FSA WC PC++ T  LV+ Y  ++  G + E++ +S D  E  F+++F  MPWLAVP+ DE    +L   Y +  IP+LI L   G +I  +  + ++ D     +P+  K   EL  ++
Sbjct:  177 IYFSAYWCPPCRSLTRVLVESYRKIKESGQKFEIVLVSADRSEESFKQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPNLIILDPKGEVITRQGRVEVLRDIDCKEFPWHPKPVVELTELN 298          
BLAST of EY680175 vs. ExPASy Swiss-Prot
Match: TYPX_TRYBB (Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.427e-14
Identity = 43/115 (37.39%), Postives = 70/115 (60.87%), Query Frame = 1
Query:    1 KTICLFFSANWCRPCKTFTPQLVQLYDTLRTRGTELEVIFISFDHDENGFEEHFKCMPWLAVPFDE-TLHKKLRIRYRVDRIPSLIPLASD-GTLI-EEDLIGLIEDYGADAYPF 336
            KT+ L+FSA+WC PC+ FTP L + Y+         EV+ IS+D +E+ F +++  MPWLA+PFD+ +   +L   + V+ IP+LI + +D G +I  +    +IED     +P+
Sbjct:   29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHV-AKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPW 142          
The following BLAST results are available for this feature:
BLAST of EY680175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
NXN_MOUSE4.439e-1637.29Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1[more]
NXN_BOVIN7.572e-1636.44Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1[more]
NXN_HUMAN1.687e-1536.44Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2[more]
NXN_DANRE2.203e-1535.45Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1[more]
NXN_XENLA8.372e-1533.61Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1[more]
TYPX_TRYBB5.427e-1437.39Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-C01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680175 ID=EY680175; Name=EY680175; organism=Citrus sinensis; type=EST; length=890bp
AAGACAATTTGCCTCTTCTTCTCTGCTAACTGGTGCAGACCATGTAAAAC
TTTTACTCCGCAATTGGTGCAACTTTATGACACGCTAAGAACCAGAGGTA
CAGAGCTGGAAGTTATCTTCATTTCCTTTGACCATGATGAGAATGGATTC
GAGGAGCACTTCAAGTGTATGCCCTGGCTTGCTGTTCCATTTGATGAAAC
CTTGCATAAAAAATTGAGAATCAGGTATCGAGTTGATCGCATCCCATCGC
TCATTCCATTAGCTTCAGATGGGACATTAATTGAAGAAGACTTGATCGGA
TTGATTGAAGACTATGGAGCTGATGCATATCCTTTCACCAGAAAGAGAAG
GGAAGAATTGAAGGCTATTGATGATTCCAAGAGGCAGGGAGGGAAATTAG
AACAGCTTTTGGCAATTGAAGGACGAGACTATGTTCTTTCTAGAGATCAT
AGAAAGATAACAGTATCTGAACTTGCTGGGAAGACTATAGGACTTTACTT
TGGTGCACATTGGGTGCCCTCCTTGTCGTTCTTTTCACTTCTCAACTTAT
AAAAGGCCACCACGAGCTCAAAAACCACAGCAAATCACGGCTTTTGAAGT
TGTTTTAGTCCCCTCCGGATCGAAACCCCCACAATCTTGATCCTCATCCC
AATATCCCGGCCATGGCTGGGATTTCCTTTAAGAGGGACAGGGCCCGACC
GGACCTCGGGGTAAAACCCTCTCCCTCCAAAGGGGAATCCCGGCTTTTGT
CCCTAATTTGGCCCCGATGGGGAGAACAGTTCGGCACCAGGGGGGGAGGA
GGAGTTTCCCCCCCCTGGGGGGGGGGTTAAGCCTTTTCCCTTTATCAAGG
CCATGGGATTTGGTCCATTAATGAACCAACCCCTTATAAG
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