EY680134

Overview
NameEY680134
Unique NameEY680134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680134 vs. ExPASy Swiss-Prot
Match: IPT2_ARATH (tRNA isopentenyltransferase 2 OS=Arabidopsis thaliana GN=IPT2 PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 4.137e-67
Identity = 130/215 (60.47%), Postives = 157/215 (73.02%), Query Frame = 1
Query:    1 EQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFEDFLSIYHSADRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSDEVWTAQVVGPAVKTIRAFLSEDERLMPNLAGMIGTSVNSTERDLWTQYVCKACGDKVLRGAYEWEQHKQGRRHRK 645
            EQRVD M+DAGLLDEVYDIY   ADYTRGLRQ+IGVREFEDFL I+         S      L S + DDK +K+ +R IL    DD+L+++LEEAIDRVKLNTRRL+R QKRR++RL+T+FGW+IHY+D+TE I  KS+E W AQVV PA + IR FL  +       +G   TS  S ERDLWTQYVC+ACG+K+LRG +EWE HKQGR HRK
Sbjct:  243 EQRVDAMVDAGLLDEVYDIYKPGADYTRGLRQSIGVREFEDFLKIH--------LSETCAGHLTSLSNDDKVMKENLRKILNFPKDDKLRIMLEEAIDRVKLNTRRLLRRQKRRVSRLETVFGWNIHYIDATEYILSKSEESWNAQVVKPASEIIRCFLETETE-----SGRDPTSGKSIERDLWTQYVCEACGNKILRGRHEWEHHKQGRTHRK 444          
BLAST of EY680134 vs. ExPASy Swiss-Prot
Match: IPT5_ARATH (Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis thaliana GN=IPT5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 1
Query:    4 QRVDCMIDAGLLDEVYDIYN-ANADYTRGLRQAIGVREFEDFLSIYHSADRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESI---SCKSDEVWTAQVVGPAVKTIRAFLS 480
            +RVD M++ GL+DEV  I++ +++DY+ G+R+AIGV E ++FL                                  R+ +++   +  + LLE AI+++K NT  L   Q +++ RL   + W++H VD+TE       ++DE W   V  P+   +  FLS
Sbjct:  170 ERVDKMVEMGLVDEVRRIFDPSSSDYSAGIRRAIGVPELDEFL----------------------------------RSEMRNYPAETTERLLETAIEKIKENTCLLACRQLQKIQRLYKQWKWNMHRVDATEVFLRRGEEADEAWDNSVAHPSALAVEKFLS 298          
The following BLAST results are available for this feature:
BLAST of EY680134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
IPT2_ARATH4.137e-6760.47tRNA isopentenyltransferase 2 OS=Arabidopsis thali... [more]
IPT5_ARATH1.106e-1129.45Adenylate isopentenyltransferase 5, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-G08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680134 ID=EY680134; Name=EY680134; organism=Citrus sinensis; type=EST; length=878bp
GAACAAAGAGTTGACTGCATGATAGATGCTGGATTGCTTGATGAGGTGTA
TGACATTTACAATGCGAATGCTGATTATACCAGAGGTCTGCGGCAGGCCA
TAGGTGTTCGGGAGTTTGAGGATTTTCTGAGCATTTACCATTCTGCGGAC
AGAGATAACAAGACAAGTGGACCTACTAATGCAACTCTGAATTCTAGAAA
CAAGGATGACAAGACATTGAAAGACTGTATGAGAGCAATACTTAAGTCAT
CCGCTGATGATCAACTAAAAGTACTTTTAGAAGAGGCCATTGATCGAGTA
AAATTAAACACCAGAAGACTTGTTCGATGTCAAAAGAGGAGGCTCAATCG
ACTTCAAACTTTGTTTGGATGGGACATTCATTATGTTGATTCAACAGAAT
CCATTTCATGCAAATCAGATGAAGTGTGGACTGCACAAGTGGTTGGACCT
GCTGTGAAAACTATTAGAGCTTTCCTTAGTGAAGATGAAAGATTGATGCC
TAATTTGGCGGGTATGATTGGCACATCGGTGAATTCAACTGAAAGAGATT
TGTGGACTCAATATGTATGCAAGGCTTGTGGAGACAAGGTTCTTAGAGGT
GCATACGAGTGGGAGCAGCACAAACAGGGTCGCAGGCATCGAAAAACAAA
TTTATAATCTTAGGAAGTCCCAAAAATTCACCTCAGCAGGTCAGCAGCAT
CAACAGCAAAACCACCTCTGTAACTACCGAACAATCCTTCAAGGGCTGGC
CAGGTTTCAAAAAAAAAATTTGAAGGTTGTCCTTCCCCCCCTTTTGACCC
CCTCAGCCCCAAAAAAAATTTCCTCCTTTCCCTTTGTTTCCCTCCCCCCC
ACCCCGGAACGGTGAAACGTAAAAAACC
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