EY680131

Overview
NameEY680131
Unique NameEY680131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680131 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.054e-60
Identity = 131/222 (59.01%), Postives = 161/222 (72.52%), Query Frame = 2
Query:   86 NLRSSFFSTLQPRFTPFASAKSFTNSLNFTKKQRPRITCQVSAATVEKKSIAKAQSDVESLFSSSADEFEN-KKYSNKQSNTGASSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALKSAVDDMDLRGRLLDEFDLLAKKTQA 748
            +LRS+FF+ L  R +P  S     +S++  ++    I  QVS  ++E  S+ + Q ++ESLFS    + ++ +K + K S  GAS ISSGVKLENI KSYKGVTVLKDVTWE              AGKTTQLRII GQEEPDSGNVIKAK NMK+AFLSQEFEVSMS+TVREEFM+AFKEEMEI  KLE+VQKA++ +VDD+DL GRLLDEFDLL ++ QA
Sbjct:   11 DLRSTFFTGL--RTSPIPSNFIKISSISNPRRDISTIRAQVSTISLET-SVKQRQDEIESLFSKQPSQQDSDRKRNGKSSKNGASGISSGVKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMKVAFLSQEFEVSMSKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDEFDLLQRRAQA 229          
BLAST of EY680131 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 6.618e-55
Identity = 125/223 (56.05%), Postives = 150/223 (67.26%), Query Frame = 2
Query:   86 NLRSSFFSTLQPRFTPFASAKSFTNSLNFTKKQR---PRITCQVSAATVEKKSIAKAQSDVESLFSSSADEFENKKYSNKQSNTGASSISSGVKLENISKSYKGVTVLKDVTWEXXXXXXXXXXXXXXAGKTTQLRIIAGQEEPDSGNVIKAKSNMKIAFLSQEFEVSMSRTVREEFMSAFKEEMEIAGKLERVQKALKSAVDDMDLRGRLLDEFDLLAKKTQ 745
            NLRS+FF T             FT  L+     R   P I   VSAA+        + S++ESL S+      ++K  +KQSN GASSISSGV+LENISKSY+G+TVLKDVTWE              AGKTTQLRII GQEEPDSGNVI AK N+K+AFLSQEFEVSM +TV+EEFM  FKEEMEIA KLE +QKA++ AVDD++L G+LLDEFDLL ++ Q
Sbjct:   11 NLRSTFFFT-----NTITCPTLFTFKLSSVSNPRRVFPNIRAHVSAAS--------SNSELESLLST------DRKLISKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEEFMCTFKEEMEIARKLENLQKAIEEAVDDLELMGKLLDEFDLLQRRAQ 214          
The following BLAST results are available for this feature:
BLAST of EY680131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AB5F_ARATH1.054e-6059.01ABC transporter F family member 5 OS=Arabidopsis t... [more]
AB2F_ARATH6.618e-5556.05ABC transporter F family member 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-G05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680131 ID=EY680131; Name=EY680131; organism=Citrus sinensis; type=EST; length=914bp
CTTGGCCCTCCAATACCCAGAAATTTTCCTTCACTGTCTTTCGGTTTCTG
GCTATCCAAACATGGACGTAACAACCACGACCACCAACCTCCGCTCCTCC
TTCTTCAGCACTTTGCAGCCTCGTTTCACACCATTTGCATCCGCAAAATC
CTTCACAAACTCACTCAATTTCACGAAAAAACAACGACCTCGAATCACAT
GCCAAGTATCAGCTGCCACCGTTGAAAAAAAATCAATCGCCAAGGCACAA
AGCGACGTCGAATCACTGTTTTCGAGTTCAGCCGATGAATTCGAGAACAA
GAAGTACTCAAACAAGCAATCAAACACGGGGGCTTCCAGTATTTCATCTG
GGGTAAAGTTAGAAAACATAAGCAAGAGCTACAAAGGAGTGACTGTATTG
AAAGACGTGACATGGGAAGTGAAAAAGGGCGAGAAAGTTGGCTTAGTGGG
CGTTAATGGAGCGGGGAAAACGACCCAGTTGAGAATTATCGCAGGGCAAG
AGGAACCCGATTCGGGGAATGTGATAAAGGCGAAGAGTAATATGAAAATT
GCGTTCTTGAGCCAAGAATTCGAGGTTTCAATGAGCAGAACGGTAAGAGA
AGAGTTTATGAGTGCGTTTAAAGAGGAAATGGAGATTGCTGGGAAGTTGG
AGAGAGTGCAAAAGGCTTTAAAAAGTGCTGTTGATGATATGGATTTGAGG
GGGAGACTTTTGGATGAATTTGATTTGTTGGCAAAGAAAACACAAGCGTG
TGAATTTGGGAAACGTTGGAATGGTAAGGGTAGTAAATTTGGAAGCCGGA
ACCTAGGAATTTACGGGGGGAAAAAAGGGAAAAAAAGGTTGGGGGGGCAT
CCTTTAAAAAAAGGGGGGGGGAAAAAAAAAAAATGGGGCCCCCGGGGGAA
AAAATTTTGGTTTG
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