EY680083

Overview
NameEY680083
Unique NameEY680083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: AGD11_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana GN=AGD11 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.037e-44
Identity = 85/126 (67.46%), Postives = 103/126 (81.75%), Query Frame = 1
Query:  268 SGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFNFDEQAL 645
            S PR RLE LL+QPGN++CADCGSP+PKWVSLS GVFICIKCSG+HRSLGVHISKVLSVKLDEWT++QVD L   GGN AVN+++EA      KKP P+S  +ER+DFIR+KYE+ +F +  + AL
Sbjct:   44 SDPRDRLEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQVDMLVGYGGNTAVNERFEACNIDQSKKPKPDSTNEERNDFIRKKYEQHQFMDPKDGAL 169          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: AGD13_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana GN=AGD13 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.559e-35
Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 1
Query:  268 SGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEF 621
            SG R R+ +LL QP NR CADCG+ DPKW S + GVFIC+KC G+HRSLG HISKVLSV LDEW++E+VD++ E+GGN + N  YEA+ P    KP P+   D+R  FIR KYE  EF
Sbjct:   13 SGKR-RIRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFLPDTCSKPGPDVNHDQRMRFIRAKYELQEF 129          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: AGD12_ARATH (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana GN=AGD12 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.559e-35
Identity = 70/118 (59.32%), Postives = 87/118 (73.73%), Query Frame = 1
Query:  268 SGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEF 621
            SG R R+ +LL Q  NR CADCG+PDPKW S + GVFIC+KC G+HRSLG HISKVLSV LDEW++E+VD++ E+GGN + N  YEA+ P    KP P++  D+R  FIR KYE  EF
Sbjct:   13 SGKR-RIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQEF 129          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus GN=Smap2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.714e-27
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  259 KNVSGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFN 627
            K+V   +A L NLL +  N+ CADC S  P+W S + GVFICI+C+GIHR+LGVHIS+V SV LD+WT EQ+  + EM GN   N+ YEAY P   ++P  +  ++    FIR KYEK ++ +
Sbjct:    7 KDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAYLPETFRRPQIDPAVE---GFIRDKYEKKKYMD 125          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: SMAP2_HUMAN (Stromal membrane-associated protein 2 OS=Homo sapiens GN=SMAP2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.714e-27
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  259 KNVSGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFN 627
            K+V   +A L NLL +  N+ CADC S  P+W S + GVFICI+C+GIHR+LGVHIS+V SV LD+WT EQ+  + EM GN   N+ YEAY P   ++P  +  ++    FIR KYEK ++ +
Sbjct:    7 KDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAYLPETFRRPQIDPAVE---GFIRDKYEKKKYMD 125          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: SMAP2_BOVIN (Stromal membrane-associated protein 2 OS=Bos taurus GN=SMAP2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.714e-27
Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  259 KNVSGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFN 627
            K+V   +A L NLL +  N+ CADC S  P+W S + GVFICI+C+GIHR+LGVHIS+V SV LD+WT EQ+  + EM GN   N+ YEAY P   ++P  +  ++    FIR KYEK ++ +
Sbjct:    7 KDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAYLPETFRRPQIDHAVE---GFIRDKYEKKKYMD 125          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus GN=SMAP2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.662e-26
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 1
Query:  259 KNVSGPRARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFN 627
            ++V   +A L +LL +  N++CADC +  P+W S + GVFICI+C+GIHR+LGVHIS+V SV LD+WT EQ+  + EM GN   N+ YEA+ P N ++P  +  ++    FIR KYEK ++ +
Sbjct:    7 RDVERYQAVLGSLLSEEENKYCADCQAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEM-GNGKANRLYEAFLPENFRRPQTDQAVE---GFIRDKYEKKKYMD 125          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: SMAP1_MOUSE (Stromal membrane-associated protein 1 OS=Mus musculus GN=Smap1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.095e-25
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = 1
Query:  286 LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFN 627
            L  LLR+  N++CADC +  P+W S + GVFICI+C+GIHR+LGVHIS+V SV LD+WT EQ+  + +M GN      YEA  P N ++P  +  ++    FIR KYEK ++++
Sbjct:   21 LSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQCMQDM-GNTKARLLYEANLPENFRRPQTDQAVE---FFIRDKYEKKKYYD 130          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens GN=SMAP1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.095e-25
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = 1
Query:  286 LENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFN 627
            L  LLR+  N++CADC +  P+W S + GVFICI+C+GIHR+LGVHIS+V SV LD+WT EQ+  + +M GN      YEA  P N ++P  +  ++    FIR KYEK ++++
Sbjct:   21 LSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDM-GNTKARLLYEANLPENFRRPQTDQAVE---FFIRDKYEKKKYYD 130          
BLAST of EY680083 vs. ExPASy Swiss-Prot
Match: ADAP1_HUMAN (Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.538e-23
Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  277 RARLENLLRQPGNRHCADCGSPDPKWVSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPNPNSFIDERSDFIRRKYEKLEFFNFDEQ 639
            RA LE LL++PGN  CADCG+PDP W S + GVFIC+ CSGIHR++   +SKV SV+LD W   QV+ +A   GN A   ++E+  P    +P P+     R  +IR KYE+ EF   ++Q
Sbjct:    7 RAVLE-LLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEFMAS-HGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQ 124          
The following BLAST results are available for this feature:
BLAST of EY680083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
AGD11_ARATH1.037e-4467.46Probable ADP-ribosylation factor GTPase-activating... [more]
AGD13_ARATH2.559e-3559.32Probable ADP-ribosylation factor GTPase-activating... [more]
AGD12_ARATH2.559e-3559.32ADP-ribosylation factor GTPase-activating protein ... [more]
SMAP2_MOUSE5.714e-2748.78Stromal membrane-associated protein 2 OS=Mus muscu... [more]
SMAP2_HUMAN5.714e-2748.78Stromal membrane-associated protein 2 OS=Homo sapi... [more]
SMAP2_BOVIN5.714e-2748.78Stromal membrane-associated protein 2 OS=Bos tauru... [more]
SMAP2_CHICK1.662e-2646.34Stromal membrane-associated protein 2 OS=Gallus ga... [more]
SMAP1_MOUSE4.095e-2547.37Stromal membrane-associated protein 1 OS=Mus muscu... [more]
SMAP1_HUMAN4.095e-2547.37Stromal membrane-associated protein 1 OS=Homo sapi... [more]
ADAP1_HUMAN6.538e-2347.11Arf-GAP with dual PH domain-containing protein 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-C03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680083 ID=EY680083; Name=EY680083; organism=Citrus sinensis; type=EST; length=901bp
CGGACGCGTGGGTTCCAAATGCAATTTGTTCAAAGCATTTATGACTTTCA
AGTTTAATTTGGATGTGCATTGTGCAGAGGAGAAGCTGATAGGGACCTTT
TTTATTAATTTTGAGAAGCAATTTTATGTTTACCCATTTGCTTTAACACA
AAGAAGGAGATGATAAATGGCTTCGCTGAGATTGTAGCAGCGTTCTGATG
ATTCTGGTCTTATATTTGGAGGCTGGAGATGGCAACCCAGCATGCAAATT
CTGATCCCAAAAATGTTTCTGGTCCACGAGCAAGGCTGGAGAATCTATTG
AGGCAACCCGGTAATAGGCATTGTGCAGATTGTGGATCTCCTGATCCAAA
ATGGGTATCATTAAGTACTGGAGTGTTTATTTGTATCAAGTGTTCTGGTA
TTCATAGAAGCCTTGGAGTGCATATATCAAAGGTTCTATCAGTGAAGCTT
GATGAATGGACAAATGAACAAGTTGATGCTTTGGCAGAAATGGGCGGCAA
TATTGCAGTAAACAAGAAGTATGAAGCTTACACTCCTGGCAATCTCAAGA
AACCAAATCCGAATTCGTTTATAGACGAGCGCTCAGATTTTATCAGGAGA
AAATACGAGAAGCTAGAATTTTTTAATTTTGATGAACAGGCGTTATTATG
CCCCATACCCGGCTCCCCATAAACGTTCCTCATCCCCCAGCACTAGTTCC
TCCAGCCCTGGTAAGAAACCTTTACGAAAAACAAGCCACAAAGACATCCT
AATTGGGAATCCCTTTTCGTAAAAGCTGGGGGAAAAAAAGGAATCCGAAA
GATAAGAAACTCTAAAAAGGGGCCACCCCCTGGGGACCCAGGGGTTGGAT
TTTGGTTGGGATTGGATTAAGGGGCAAGTGGGGGCCAAAAGGGCCCCACC
C
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