EY680063

Overview
NameEY680063
Unique NameEY680063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680063 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.728e-12
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = -2 
Query:  445 RSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCRDIISFPQ 588
            RSYFRCTHKY QGC+ATKQVQ+ + +P+M+  TYIG+HTC      P+
Sbjct:  140 RSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTCNTNAETPK 187
[Close]
BLAST of EY680063 vs. ExPASy Swiss-Prot
Match: WRK54_ARATH (Probable WRKY transcription factor 54 OS=Arabidopsis thaliana GN=WRKY54 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = -2 
Query:  469 RSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTC 588
            RSY RCTHK  QGC+ATKQVQ++D D +M+  TYIG+HTC
Sbjct:  172 RSYLRCTHKPTQGCKATKQVQKQDQDSEMFQITYIGYHTC 211
The following BLAST results are available for this feature:
BLAST of EY680063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
WRK70_ARATH9.728e-1260.42Probable WRKY transcription factor 70 OS=Arabidops... [more]
WRK54_ARATH6.305e-1167.50Probable WRKY transcription factor 54 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680063 ID=EY680063; Name=EY680063; organism=Citrus sinensis; type=EST; length=691bp
CCACGCGTCCGTTTTTTTAAGCAAAAAGGATGGAGTTTTGTTATTCCACA
AAAGTAATTATACTAGTGTACAAGGAATGGCCAGTGGGTTAACTGTGCTT
AATTGAACTTTACAAGAATCCTAAAAGATTCCGCTGTCATCAAAATGAAA
CCCATGCTCAAAATCATTGTACATGTCCAAGCTATGAGAAGAGATCATCT
TGTTATTGTTACATGAAAACACCATGGCTGCTGCTTCTGGCTCATCAGAT
GATTGAAAAGAAACAAAATCTTCCCACGCAATTGAATCCAGAGAGGACAA
ATCTTGATGATCTGTGCTTGTTGTCTCTTCCTTGCATTCTTGTTTGATTT
CTTCTGTCGGGATGCTAGACGAGGAACTCACTACAAAAGAACCACCAGTG
CTAATAGTACTACCCCAATTAGGCTCAGAACTTTCAGCCACAATTTGTGG
GAAGCTGATGATATCTCTGCAGGTATGATGGCCTATGTATGTTGTATCAT
ACATTTGTGGATCATCGTCTCTTCTTTGAACTTGTTTCGTTGCCCGGCAG
CCCTGCACATACTTATGCGTACACCTGAAGTAGCTCCTGTAATCAATAAC
AATAAAGATCTATTCATAGTTTAGCCATCAATAGTTTAATAACATTCACA
AGGGCGCTGCTATATACAGAATTACACAAAAAAAAAAAAAA
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