EY680053

Overview
NameEY680053
Unique NameEY680053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680053 vs. ExPASy Swiss-Prot
Match: CCR4A_ARATH (Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana GN=CCR4-1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.069e-51
Identity = 91/128 (71.09%), Postives = 109/128 (85.16%), Query Frame = 2 
Query:  284 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDNAVTTEDVPESAPIDGHFLRYKWYRIQSDRKVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVSSNCGCKVLVK*KRGMEKEEL 667
            MLSV+RVHLPS+IPIVGCELTPYVLLRRPD   +T+DVPESAP++GHFL+Y+W+R+QSD+KVA+CSVHPSE ATLQCLGC+K+K+PVAKSYHCS KCFSDAWQHHRV          +   G ++EEL
Sbjct:    1 MLSVIRVHLPSEIPIVGCELTPYVLLRRPDKTPSTDDVPESAPLEGHFLKYRWFRVQSDKKVAICSVHPSETATLQCLGCLKSKVPVAKSYHCSTKCFSDAWQHHRVLHERAASAATE---GNDEEEL 125
[Close]
BLAST of EY680053 vs. ExPASy Swiss-Prot
Match: CCR4B_ARATH (Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana GN=CCR4-2 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 1.175e-46
Identity = 81/106 (76.42%), Postives = 96/106 (90.57%), Query Frame = 2 
Query:  284 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDNAVTTEDVPESAPIDGHFLRYKWYRIQSDRKVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 601
            MLSV+RVHLPS+IPIVGCELTPYVL+RRPD   TT+DVPESAP++G+FLRY+WYR+QSD+KV +CSVHP+EQATLQC+ C K +  V KSYHCSPKCF+DAWQHHR
Sbjct:    1 MLSVIRVHLPSEIPIVGCELTPYVLVRRPDKNSTTDDVPESAPLEGYFLRYRWYRVQSDKKVTICSVHPTEQATLQCVFCSKRRSLVPKSYHCSPKCFTDAWQHHR 106
The following BLAST results are available for this feature:
BLAST of EY680053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CCR4A_ARATH2.069e-5171.09Carbon catabolite repressor protein 4 homolog 1 OS... [more]
CCR4B_ARATH1.175e-4676.42Carbon catabolite repressor protein 4 homolog 2 OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-H08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680053 ID=EY680053; Name=EY680053; organism=Citrus sinensis; type=EST; length=941bp
TTCTTTCACTATTCACGAAAGATCCGTACTGATTTCTGTATACGATCATT
TTTTAGGGTTTTGATTTTGTTAGTCAAGGCTGGCGGGTAATCGGGTCAAG
TAAATGGCGGATCCGCCACGTGTCCGCCACAACTCCGGTAATAATCGTTC
TCTTCTTCTTGTTCGGAATCGGACTGTGAGACTAGATAGAGGTATTGTTG
CTGTTGGTGTTGGATTGAAGGAAGAGGATTTGATAATATCACAGAGCGGT
GACGAAAGCCAAGAGTGAAACATATAAAGAAGCATGCTGAGTGTGCTGCG
CGTGCACCTTCCGTCGGATATTCCTATTGTAGGCTGTGAACTCACGCCGT
ACGTGCTCTTACGGCGCCCCGATAATGCTGTCACCACCGAAGATGTCCCC
GAGTCGGCCCCAATTGATGGTCATTTCTTGAGATACAAGTGGTATCGTAT
ACAAAGTGATAGAAAAGTTGCTGTATGTAGCGTACATCCTTCTGAGCAAG
CCACTCTGCAGTGTCTAGGTTGTGTTAAGGCTAAAATACCTGTTGCCAAA
AGTTACCATTGCTCACCAAAGTGCTTCTCTGATGCCTGGCAACATCATCG
TGTTTCTTCAAATTGTGGCTGCAAAGTGCTGGTAAAATGAAAAAGGGGAA
TGGAAAAGGAGGAGTTGTTTGGGCCGTTTTCAATAAAACTGGGATTCAGG
GACTTATTCAGAGCTAAGTTTTTATCTGGGTTTCTGCCCTCCAATTTCCT
AACCTAGAAGAAAGGGGTTCCAAACACCTTTTTTATCCCCGGCCTCGCAT
TAACACAAGAAAATGGAAGGTTGAAAATTTGGTTTTTGAAATATTGGGAA
ACAAATACTGAAATGTACTCCTCCCAGATCCCGCCCAATAAAACTTTGTG
ACGGAGAGGCATTAAGAAATATTTAAAGTTGGGCTCCACTA
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