EY680051

Overview
NameEY680051
Unique NameEY680051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680051 vs. ExPASy Swiss-Prot
Match: Y1222_ARATH (Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana GN=At1g32220 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1 
Query:   49 ISCVGGFGSNSYMYKINGTANINAIRAASEKGVKRFVYISAADFGVANYLL-QGYYEGKRAAETELLTRYPYGG 267
            +S +GGFG+   M +ING AN+ A+ AA + GV +FV I+  D+ +  ++L  GY+ GKR AE ELL++YP  G
Sbjct:  131 VSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFILSNGYFTGKRNAEAELLSKYPTSG 204
The following BLAST results are available for this feature:
BLAST of EY680051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1222_ARATH1.833e-1245.95Uncharacterized protein At1g32220, chloroplastic O... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-H06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680051 ID=EY680051; Name=EY680051; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGGTTGATCTCTCTGGCTAACTTTAGTTTAATTATCTAGAT
CTCCTGTGTTGGAGGTTTTGGGTCCAACTCTTACATGTATAAGATTAATG
GGACTGCAAACATCAATGCAATCAGAGCTGCTTCAGAAAAAGGTGTGAAA
AGATTTGTTTATATCTCTGCTGCTGACTTTGGTGTGGCAAATTACTTACT
GCAAGGATATTACGAGGGAAAGAGAGCTGCTGAGACAGAGTTACTGACCA
GATACCCTTATGGAGGTTAGTTTTATTCTTTCTCAGTCAATATTGTAGCA
TTTTAGCATGTTGACGTAGTTGTGACTTGTGAGATTTTATATCTGAATGC
CTGTATCAGTTTTTAAAATATCATGTGACTTTATTAGCACAATCTATCGA
TTCCAACATCCATTGACATGAGAACATATAATTGCCTTGTCTATTTGAGC
CGTGGAGACAGAACTATCAGTTGATAGTTCTAGTGTGTGACTGAACTTTT
TGTACGAGTTTGTTTCAGGAGTGATTTTAAGGCCGGGGTTTATATATGGA
ACTCGAACTGTTGGGGGCATGAAGCTACCTCTTGGCGTGATTGGTTCTCC
AATGGAGATGGTTCTCCAACATGCAAAACCACTGAGCCAACTGCCACTTG
TAAGGACCTCCATTCACTCCTCCCGTTAACGTTACCGTTTGTGGCCAAGG
TTGCTGTTAAGACCTGCCAACCAATCCTGTTTTTCCTCCCGGGAAATCTA
AAAGGTCCCCGGAAATACTGCGTTAACATTCAAAAATCCAAAAAAAATTT
TGTTGAATTCTCTTACTTCCAGTTTGCGGTTTTTTTCCACAAAACAGAAT
TTTTCAAAAAGGAAACTGGCCAAAACCCATTTGCCCCTTTTTCTTTTTTT
TTCTTTTTTTAAAAT
back to top