EY744816

Overview
NameEY744816
Unique NameEY744816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SHEWM (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rihA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.539e-12
Identity = 40/113 (35.40%), Postives = 68/113 (60.18%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMDQ 354
            +I+ DPEAAD+VF +G  I + G+++T Q ++ D D+  +R  +    Q + D+  F+  +H     G  G  LHDP +   L++P+LFT ++  V +ET+G  T G T++D+
Sbjct:  166 NIFVDPEAADMVFKAGIPITMCGLDVTHQAQVMDEDIARIRAIENPIAQCVADLLDFFILYHRDPKWGFTGAPLHDPCTIAWLLKPELFTAQQAWVGIETKGEHTQGMTVVDR 278          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_ENT38 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Enterobacter sp. (strain 638) GN=rihA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.929e-12
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWH-VKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMD 351
            +I+ DPEAA++VF SG  I + G+++T + ++  AD+   R         + ++  F+ ++H  +  G HG  LHDP +   L++P+LFT     V VETQG  T G T++D
Sbjct:  166 NIFVDPEAAEIVFQSGLPIVMAGLDVTHRAQIMSADVERFRAIGNPVATTVAELLDFFMEYHKAEKWGFHGAPLHDPCTIAWLLKPELFTTVDRWVGVETQGKYTQGMTVVD 277          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_PHOPR (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Photobacterium profundum GN=rihA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.011e-11
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMDQ 354
            +IY DPEAAD+VF SG  I + G+++T + ++ D D+ ++R+      Q+  ++  F+  +H     G  G  LHDP +   L+ P+LF      V +ETQG  T G T++D+
Sbjct:  166 NIYVDPEAADIVFKSGIPITMCGLDVTHRAQIMDEDIEKIRKINNPVAQVTAELLDFFMIYHRDPKWGFEGAPLHDPCTIAWLLEPELFASINCWVGIETQGSHTLGMTVVDR 278          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SALPK (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella paratyphi A (strain AKU_12601) GN=rihA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.253e-11
Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMD 351
            +IY DPEAA++VF SG  + + G+N+T + ++  AD+   R        ++ ++  F+ ++H     G  G  LHDP +   L++P++FT  +  V VETQG  T G T++D
Sbjct:  166 NIYVDPEAAEIVFQSGIPVVMAGLNVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVD 277          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SALPA (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella paratyphi A GN=rihA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.253e-11
Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMD 351
            +IY DPEAA++VF SG  + + G+N+T + ++  AD+   R        ++ ++  F+ ++H     G  G  LHDP +   L++P++FT  +  V VETQG  T G T++D
Sbjct:  166 NIYVDPEAAEIVFQSGIPVVMAGLNVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVD 277          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SHEB8 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella baltica (strain OS185) GN=rihA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 39/113 (34.51%), Postives = 64/113 (56.64%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMDQ 354
            +I+ DPEAAD+VF SG  I + G+++T Q ++ D D+  +R       Q + ++  F+  +H     G  G  LHDP +   L++P+LF  +   V +ETQ   T G T++D+
Sbjct:  166 NIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIRAIPNPIAQCVAELLDFFMIYHRDPKWGFIGAPLHDPCTIAWLLKPELFEAQDCWVGIETQSELTLGMTVVDR 278          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SHEB5 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rihA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 39/113 (34.51%), Postives = 64/113 (56.64%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMDQ 354
            +I+ DPEAAD+VF SG  I + G+++T Q ++ D D+  +R       Q + ++  F+  +H     G  G  LHDP +   L++P+LF  +   V +ETQ   T G T++D+
Sbjct:  166 NIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIRAIPNPIAQCVAELLDFFMIYHRDPKWGFIGAPLHDPCTIAWLLKPELFEAQDCWVGIETQSELTLGMTVVDR 278          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SALTY (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella typhimurium GN=rihA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMD 351
            +IY DPEAA++VF SG  + + G+++T + ++  AD+   R        ++ ++  F+ ++H     G  G  LHDP +   L++P++FT  +  V VETQG  T G T++D
Sbjct:  166 NIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVD 277          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SALSV (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella schwarzengrund (strain CVM19633) GN=rihA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMD 351
            +IY DPEAA++VF SG  + + G+++T + ++  AD+   R        ++ ++  F+ ++H     G  G  LHDP +   L++P++FT  +  V VETQG  T G T++D
Sbjct:  166 NIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVD 277          
BLAST of EY744816 vs. ExPASy Swiss-Prot
Match: RIHA_SALHS (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella heidelberg (strain SL476) GN=rihA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.561e-11
Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 DIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADLLELRQSKGRYVQLLGDMCKFYRDWHVKSD-GVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICT-GHTLMD 351
            +IY DPEAA++VF SG  + + G+++T + ++  AD+   R        ++ ++  F+ ++H     G  G  LHDP +   L++P++FT  +  V VETQG  T G T++D
Sbjct:  166 NIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVD 277          
The following BLAST results are available for this feature:
BLAST of EY744816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
RIHA_SHEWM4.539e-1235.40Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_ENT385.929e-1235.71Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_PHOPR1.011e-1135.40Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALPK2.253e-1134.82Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALPA2.253e-1134.82Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SHEB88.561e-1134.51Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SHEB58.561e-1134.51Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALTY8.561e-1133.93Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALSV8.561e-1133.93Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALHS8.561e-1133.93Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744816 ID=EY744816; Name=EY744816; organism=Citrus sinensis; type=EST; length=984bp
CCACGCGTCCGCGGCTGAAGCGATATTTATGGAGACCCTGAAGCAGCAGA
TGTTGTGTTTACCTCTGGGGCAAACATTGCTGTTGTTGGAATAAACATTA
CTACGCAAGTCAAACTGACAGATGCCGACTTGCTTGAATTGAGGCAATCT
AAAGGAAGGTATGTTCAGCTATTGGGTGACATGTGCAAATTTTACCGAGA
CTGGCATGTGAAGTCTGATGGTGTCCATGGCATTTTCCTACACGACCCTG
TTAGTTTTGTGGCATTAGTTCGGCCAGATCTCTTCACATTCAAGAAGGGA
GTTGTGAGGGTTGAGACGCAAGGAATATGTACGGGGCATACACTAATGGA
TCAAGGACTGAAAAGATGGAATGTTAGTAATCCATGGACAGGCTATTCCC
CTGTTTCAGTTGCTTGGACGGTCAATGTGGATAAAGTGCTCAATTATATT
AAAAGACTGCTGATGAAACAATGAAAGCTGCTCTAATCTGTGCTCCACAT
TTCAGAAGAGGTTAAACCTCAAAATGTGTTGGGGGTTGCCGTAAAGATCC
AGAAAACCCTCCGTCCGTTATTCTCATTTCACTGGTGACAACCCCAAATA
TTGGGTTTTAGGGAAAAAATTTGATGGAATTTCTTCTTAATGTTACCATG
CCTTTTGTGAAAAAACCTTACTCTGAAGGAATCTGAATTAATAAAAATGC
CCCATTTGGAAGTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGGGGGGCCCCCTCCAAAAGGATCCCAACGCTAACCTACCCGC
GTGGCTCGGGAGTCCATAACCCTCTTCTACAGGTGTCCCCCCAAAATTCC
ATTTCCCCTGGGCCCCCCGCTTTTTTACAGACCCCCGTGGAATAGGGGGA
AAAACCCCCGGGGCTTTTCACCCCACGCTTTTTTTGCCCCCCTTGTGCAG
ACACCAAATCCCCCCCATTTTTCCCCACACAAGG
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