EY680048

Overview
NameEY680048
Unique NameEY680048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_PSEFL (NADH-quinone oxidoreductase subunit G OS=Pseudomonas fluorescens GN=nuoG PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.554e-32
Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = -2
Query:    3 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTATSD 242
            REKN SISLIVPEAN LGLAM+GGES+DAALQAV DGSADAIVVLENDLYTRTD AK+DAALNAAKV+IVADHQKTAT+D
Sbjct:  519 REKNGSISLIVPEANSLGLAMLGGESVDAALQAVIDGSADAIVVLENDLYTRTDKAKVDAALNAAKVLIVADHQKTATTD 598          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_PSEPK (NADH-quinone oxidoreductase subunit G OS=Pseudomonas putida (strain KT2440) GN=nuoG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.129e-26
Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = -2
Query:    3 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTATSD 242
            REKN S+SL+VPEAN LGLAM+GGES+DAAL AV  G ADAIVVLENDLY R  +AK+DAAL AAKVVIVADH KTAT D
Sbjct:  519 REKNGSLSLVVPEANSLGLAMLGGESVDAALDAVISGKADAIVVLENDLYARVPAAKVDAALAAAKVVIVADHSKTATVD 598          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_PSESM (NADH-quinone oxidoreductase subunit G OS=Pseudomonas syringae pv. tomato GN=nuoG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.057e-25
Identity = 61/80 (76.25%), Postives = 68/80 (85.00%), Query Frame = -2
Query:    3 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTATSD 242
            R+K  SISLIVPEAN +GLAM GG+S+DAALQAV  G ADAIVVLENDLY R D+  +DAAL+AAKVVIVADHQKT TSD
Sbjct:  520 RDKQGSISLIVPEANSMGLAMFGGDSVDAALQAVISGKADAIVVLENDLYRRVDAKIVDAALSAAKVVIVADHQKTPTSD 599          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_PSEAE (NADH-quinone oxidoreductase subunit G OS=Pseudomonas aeruginosa GN=nuoG PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.848e-25
Identity = 57/80 (71.25%), Postives = 71/80 (88.75%), Query Frame = -2
Query:    6 RREKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTATS 245
            +REKN SISL+V EAN LGLA+ GG+S++AAL+ +T G ADA+VVLENDLY RTD+A++DAAL AAKVVIVADHQ+TAT+
Sbjct:  519 QREKNGSISLVVGEANSLGLALFGGDSVEAALERLTSGQADAVVVLENDLYRRTDAARVDAALAAAKVVIVADHQQTATT 598          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_YERPE (NADH-quinone oxidoreductase subunit G OS=Yersinia pestis GN=nuoG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = -2
Query:    3 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTATSD 242
            R  +V I+ +   AN +GL+M+GG SLD AL+ +T G AD+ +V+ENDLY      K+DAAL+    +IV DHQ+TA  D
Sbjct:  523 RGSDVGITFVASAANSIGLSMIGGGSLDQALELLTRGEADSAIVMENDLYRHAAKDKVDAALDNVANLIVVDHQRTAIMD 602          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_SALTY (NADH-quinone oxidoreductase subunit G OS=Salmonella typhimurium GN=nuoG PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13
Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = -2
Query:   12 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTA 242
            R  +V I++I    N +GL M+GG SLD AL  +  GSADA+VVLENDL+    + +++AAL  A +V+V DHQ+TA
Sbjct:  523 RGADVGITMIARSVNSMGLGMMGGGSLDDALGELETGSADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTA 599          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_SALTI (NADH-quinone oxidoreductase subunit G OS=Salmonella typhi GN=nuoG PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13
Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = -2
Query:   12 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTA 242
            R  +V I++I    N +GL M+GG SLD AL  +  GSADA+VVLENDL+    + +++AAL  A +V+V DHQ+TA
Sbjct:  523 RGADVGITMIARSVNSMGLGMMGGGSLDDALGELETGSADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTA 599          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_ECOL6 (NADH-quinone oxidoreductase subunit G OS=Escherichia coli O6 GN=nuoG PE=3 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = -2
Query:   12 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTA 242
            R  +V I++I    N +GL ++GG SL+ AL  +  G ADA+VVLENDL+    + +++AAL  A +V+V DHQ+TA
Sbjct:  523 RGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTA 599          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_ECO57 (NADH-quinone oxidoreductase subunit G OS=Escherichia coli O157:H7 GN=nuoG PE=3 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = -2
Query:   12 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTA 242
            R  +V I++I    N +GL ++GG SL+ AL  +  G ADA+VVLENDL+    + +++AAL  A +V+V DHQ+TA
Sbjct:  523 RGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTA 599          
BLAST of EY680048 vs. ExPASy Swiss-Prot
Match: NUOG_ECOLI (NADH-quinone oxidoreductase subunit G OS=Escherichia coli (strain K12) GN=nuoG PE=1 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 6.649e-12
Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = -2
Query:   12 REKNVSISLIVPEANILGLAMVGGESLDAALQAVTDGSADAIVVLENDLYTRTDSAKIDAALNAAKVVIVADHQKTA 242
            R  +V I++I    N +GL ++GG SL+ AL  +  G ADA+VVLENDL+    + +++AAL  A +V+V DHQ+TA
Sbjct:  523 RGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASAIRVNAALAKAPLVMVVDHQRTA 599          
The following BLAST results are available for this feature:
BLAST of EY680048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
NUOG_PSEFL7.554e-3288.75NADH-quinone oxidoreductase subunit G OS=Pseudomon... [more]
NUOG_PSEPK2.129e-2677.50NADH-quinone oxidoreductase subunit G OS=Pseudomon... [more]
NUOG_PSESM1.057e-2576.25NADH-quinone oxidoreductase subunit G OS=Pseudomon... [more]
NUOG_PSEAE6.848e-2571.25NADH-quinone oxidoreductase subunit G OS=Pseudomon... [more]
NUOG_YERPE4.164e-1447.50NADH-quinone oxidoreductase subunit G OS=Yersinia ... [more]
NUOG_SALTY2.699e-1349.35NADH-quinone oxidoreductase subunit G OS=Salmonell... [more]
NUOG_SALTI2.699e-1349.35NADH-quinone oxidoreductase subunit G OS=Salmonell... [more]
NUOG_ECOL65.091e-1245.45NADH-quinone oxidoreductase subunit G OS=Escherich... [more]
NUOG_ECO575.091e-1245.45NADH-quinone oxidoreductase subunit G OS=Escherich... [more]
NUOG_ECOLI6.649e-1245.45NADH-quinone oxidoreductase subunit G OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680048 ID=EY680048; Name=EY680048; organism=Citrus sinensis; type=EST; length=651bp
CGGTCGCTGGTGGCGGTTTTCTGGTGGTCGGCAACGATCACCACTTTGGC
CGCGTTCAGCGCTGCGTCAATCTTGGCCGAATCAGTACGGGTGTACAGGT
CGTTTTCCAGTACCACGATCGCATCGGCGCTGCCGTCGGTCACGGCTTGC
AGGGCGGCGTCGAGGGACTCGCCACCGACCATGGCCAGGCCAAGGATGTT
AGCCTCTGGCACAATCAGGCTGATGGAAACGTTCTTCTCGCGCCGGTTCT
CGGCTTTGGCAATGATGGCAACAGCTTCTATAATCGCCTTGAATTCCCTC
AAGGTACCGGAAATGCTCTATGGGCTCGTGGCAGACCAGCAGGGCATCAC
CGACATACCTGGGCAAGGGAAATTGCTGGGGAGGGCAGGCGGCCAAAATG
GGATAGCACTGGTGGCGTCCAAGAGCGGTGGCTCNCCAGCAGCACGCGAG
TCGACAAACGAAGTTCCAGGTGATGGATCATAAAAATCTCGGAACGACAA
GAGACAAGACTTGGGGAGCAAGGCCCGTGCCCGCTGACGACTGAAAGAGC
GTCAACCGTGCGGGAGCGGAGGGATGGATGAAGCAAGCGGGGATGTAAGG
GAGGGAATTGGCGGTGACAAGGAAAAGAAAGGAGCACGAACCTGTCGGCC
C
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